RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SHC4Q6S5L8 630 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 TCEAL8Q8IYN2 117 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 SLC44A3Q8N4M1 653 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 ITFG1Q8TB96 612 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 NOC3LQ8WTT2 800 aaKnown RBP20.11■□□□□ 0.81
CAPN1-203ENST00000525013 FGF13Q92913 245 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 NXPE3Q969Y0 559 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 FAM213AQ9BRX8 229 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 FGFBP2Q9BYJ0 223 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 CUEDC2Q9H467 287 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 DNMT3BQ9UBC3 853 aaKnown RBP20.11■□□□□ 0.81
CAPN1-203ENST00000525013 C2CD2Q9Y426 696 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 CACNA1HO95180 2353 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 ARHGEF37A1IGU5 675 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 PRPF6O94906 941 aaKnown RBP20.1■□□□□ 0.81
CAPN1-203ENST00000525013 OAZ2O95190 189 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 SEC24AO95486 1093 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 AARSP49588 968 aaKnown RBP eCLIP20.1■□□□□ 0.81
CAPN1-203ENST00000525013 ASIC1P78348 528 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 ADCY1Q08828 1119 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 HTR4Q13639 388 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 CRELD2Q6UXH1 353 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-203ENST00000525013 SAAL1Q96ER3 474 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 KBTBD4Q9NVX7 518 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 DPP3Q9NY33 737 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 CFAP45Q9UL16 551 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 MRPS23Q9Y3D9 190 aaKnown RBP20.1■□□□□ 0.81
CAPN1-203ENST00000525013 INSL5Q9Y5Q6 135 aa20.1■□□□□ 0.81
CAPN1-203ENST00000525013 IL18RAPO95256 599 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 RHOP08100 348 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 CFHP08603 1231 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 ODC1P11926 461 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 PTPN2P17706 415 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 POU5F1Q01860 360 aaKnown RBP20.09■□□□□ 0.81
CAPN1-203ENST00000525013 DNM1Q05193 864 aaKnown RBP20.09■□□□□ 0.81
CAPN1-203ENST00000525013 ATL3Q6DD88 541 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 OVOS1Q6IE37 1185 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 STXBP4Q6ZWJ1 553 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 ING5Q8WYH8 240 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 HPS3Q969F9 1004 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 SENP8Q96LD8 212 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 PRRX2Q99811 253 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 CORO1BQ9BR76 489 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 TRIM9Q9C026 710 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 TMEM206Q9H813 350 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 FAM13BQ9NYF5 915 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 AFF4Q9UHB7 1163 aaKnown RBP20.09■□□□□ 0.81
CAPN1-203ENST00000525013 KCNH3Q9ULD8 1083 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 PCDHA7Q9UN72 937 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 NUMBLQ9Y6R0 609 aa20.09■□□□□ 0.81
CAPN1-203ENST00000525013 GOLGA8IPA6NC78 632 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 GOLGA8JA6NMD2 632 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 ANHXE9PGG2 379 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 PIRO00625 290 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 SPTLC1O15269 473 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 POLR2DO15514 142 aaKnown RBP20.08■□□□□ 0.81
CAPN1-203ENST00000525013 OR4Q2P0C623 313 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 TYMPP19971 482 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 GARTP22102 1010 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 PARM1Q6UWI2 310 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 RNF19BQ6ZMZ0 732 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 SIX5Q8N196 739 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 ELMOD1Q8N336 334 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 ZSWIM2Q8NEG5 633 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 PRSS33Q8NF86 280 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 FLCNQ8NFG4 579 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 OXCT2Q9BYC2 517 aaPredicted RBP20.08■□□□□ 0.81
CAPN1-203ENST00000525013 MAFFQ9ULX9 164 aa20.08■□□□□ 0.81
CAPN1-203ENST00000525013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-203ENST00000525013 ANO9A1A5B4 782 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 OR6C75A6NL08 312 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 LDHAP00338 332 aaKnown RBP20.07■□□□□ 0.8
CAPN1-203ENST00000525013 SRFP11831 508 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 PAX3P23760 479 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 TFAMQ00059 246 aaKnown RBP20.07■□□□□ 0.8
CAPN1-203ENST00000525013 NHLH1Q02575 133 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 ASTLQ6HA08 431 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-203ENST00000525013 MTSS1LQ765P7 747 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 NPAS3Q8IXF0 933 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 EFCAB13Q8IY85 973 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 GLIS3Q8NEA6 775 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 PGLYRP2Q96PD5 576 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 CBWD1Q9BRT8 395 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 PCIF1Q9H4Z3 704 aa20.07■□□□□ 0.8
CAPN1-203ENST00000525013 RBAKQ9NYW8 714 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-203ENST00000525013 STK25O00506 426 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 EXTL3O43909 919 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 TAF6P49848 677 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 TWF1Q12792 350 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 SLC5A9Q2M3M2 681 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 IQCEQ6IPM2 695 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 ARMCX5Q6P1M9 558 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 BRSK2Q8IWQ3 736 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 FGF14Q92915 247 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 MCRS1Q96EZ8 462 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 ZNF512Q96ME7 567 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-203ENST00000525013 PYM1Q9BRP8 204 aaKnown RBP20.06■□□□□ 0.8
CAPN1-203ENST00000525013 RPP25Q9BUL9 199 aaKnown RBP20.06■□□□□ 0.8
CAPN1-203ENST00000525013 WNT16Q9UBV4 365 aa20.06■□□□□ 0.8
CAPN1-203ENST00000525013 CA14Q9ULX7 337 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms