RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 HERC6Q8IVU3 1022 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 PHOSPHO2Q8TCD6 241 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 RABGGTAQ92696 567 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 RNPC3Q96LT9 517 aaKnown RBP17■□□□□ 0.31
TSPAN4-213ENST00000524895 SPAG5Q96R06 1193 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 PAAF1Q9BRP4 392 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 EDEM3Q9BZQ6 932 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 NRDE2Q9H7Z3 1164 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 RC3H2Q9HBD1 1191 aaKnown RBP17■□□□□ 0.31
TSPAN4-213ENST00000524895 DNAJB4Q9UDY4 337 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 CAPN11Q9UMQ6 739 aa17■□□□□ 0.31
TSPAN4-213ENST00000524895 LUC7L2Q9Y383 392 aaKnown RBP17■□□□□ 0.31
TSPAN4-213ENST00000524895 KPNA7A9QM74 516 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 AKR1B15C9JRZ8 316 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 B3GAT3O94766 335 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 ASPAP45381 313 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 LILRA4P59901 499 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 ARHGAP44Q17R89 818 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 C9orf50Q5SZB4 431 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 SPOUT1Q5T280 376 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 RASIP1Q5U651 963 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 DCLRE1AQ6PJP8 1040 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 CNGA4Q8IV77 575 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 KAT5Q92993 513 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 FAXDC2Q96IV6 333 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 ARID3AQ99856 593 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 NAA15Q9BXJ9 866 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 UBE2OQ9C0C9 1292 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 AJAP1Q9UKB5 411 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 POLIQ9UNA4 740 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 PRG3Q9Y2Y8 225 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 SNX9Q9Y5X1 595 aa16.99■□□□□ 0.31
TSPAN4-213ENST00000524895 H0YGN5 161 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 SPTLC1O15269 473 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 MFAP3LO75121 409 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 KIF4AO95239 1232 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 PAX3P23760 479 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 GSDMDP57764 484 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 HTRA4P83105 476 aaPredicted RBP16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 ZBED6P86452 979 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 C3orf58Q8NDZ4 430 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 HASPINQ8TF76 798 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 MMS19Q96T76 1030 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 STK33Q9BYT3 514 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 INSL6Q9Y581 213 aa16.98■□□□□ 0.31
TSPAN4-213ENST00000524895 LRRC53A6NM62 1247 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 F8VZ95 297 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 NRP1O14786 923 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 TLL1O43897 1013 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 CAPN15O75808 1086 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 ALDH2P05091 517 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 KRT9P35527 623 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 SLC11A1P49279 550 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 ADKP55263 362 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 YWHAEP62258 255 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 DRAP1Q14919 205 aaPredicted RBP16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 SHHQ15465 462 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 DSTYKQ6XUX3 929 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 BAP1Q92560 729 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 JAKMIP2Q96AA8 810 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 PPP1R9BQ96SB3 815 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 BCO2Q9BYV7 579 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 CWH43Q9H720 699 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 SMYD3Q9H7B4 428 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 GDAP2Q9NXN4 497 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 MYO6Q9UM54 1294 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 FAN1Q9Y2M0 1017 aa16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 MRPL42Q9Y6G3 142 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-213ENST00000524895 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 RNF225M0QZC1 329 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 HUS1O60921 280 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 TADA2AO75478 443 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 GALTP07902 379 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 LAG3P18627 525 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 CD58P19256 250 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 USP8P40818 1118 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 STAT1P42224 750 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 RAP1GAPP47736 663 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 BCAR1P56945 870 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 JAM2P57087 298 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 GOLGA8FQ08AF8 430 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 GOLGA8DPQ0D2H9 430 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 FIBCD1Q8N539 461 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 APPL2Q8NEU8 664 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 ZNF558Q96NG5 402 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 RAD9AQ99638 391 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 GDF15Q99988 308 aa16.96■□□□□ 0.31
TSPAN4-213ENST00000524895 CYP3A43Q9HB55 503 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms