RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TPGS2Q68CL5 300 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 SUGP1Q8IWZ8 645 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 TCEAL8Q8IYN2 117 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 HPS3Q969F9 1004 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 FAM122AQ96E09 287 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 SAAL1Q96ER3 474 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 FAM213AQ9BRX8 229 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 KCNH6Q9H252 994 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 MAGEF1Q9HAY2 307 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 DNMT3BQ9UBC3 853 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 POLIQ9UNA4 740 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 DUSP12Q9UNI6 340 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 ZDHHC9Q9Y397 364 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 POLR2DO15514 142 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 OAZ2O95190 189 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 LAMP2P13473 410 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 ATF2P15336 505 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 PAX3P23760 479 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 WNT7BP56706 349 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 LILRA4P59901 499 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 ASIC1P78348 528 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 YWHAHQ04917 246 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 BRSK2Q8IWQ3 736 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 GLIS3Q8NEA6 775 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 RSAD2Q8WXG1 361 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 TMEM206Q9H813 350 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 CYP4F11Q9HBI6 524 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 DPP3Q9NY33 737 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 CDH7Q9ULB5 785 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 ANHXE9PGG2 379 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 PRRG1O14668 218 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 SPTLC1O15269 473 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 NARSO43776 548 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 LRG1P02750 347 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 HTR4Q13639 388 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 STXBP4Q6ZWJ1 553 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 EPM2AIP1Q7L775 607 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 USP37Q86T82 979 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 NT5DC4Q86YG4 428 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 NXPE3Q969Y0 559 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 SENP8Q96LD8 212 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 AVENQ9NQS1 362 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 KCNH3Q9ULD8 1083 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 MAFFQ9ULX9 164 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 INSL5Q9Y5Q6 135 aa12.09□□□□□ -0.47
TRAPPC4-204ENST00000524797 GOLGA8IPA6NC78 632 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 GOLGA8JA6NMD2 632 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 EXTL3O43909 919 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 VNN2O95498 520 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 LDHAP00338 332 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 ODC1P11926 461 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 CPB1P15086 417 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 HOXD13P35453 343 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 FAM26FQ5R3K3 315 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 OVOS1Q6IE37 1185 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 RNF19BQ6ZMZ0 732 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 UNC13DQ70J99 1090 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 PCIF1Q9H4Z3 704 aa12.08□□□□□ -0.48
TRAPPC4-204ENST00000524797 EIF3DO15371 548 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 RHOP08100 348 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 OR4Q2P0C623 313 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 PTPN2P17706 415 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 CASP1P29466 404 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 TAF6P49848 677 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 ADCY1Q08828 1119 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 ARMCX5Q6P1M9 558 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLC44A3Q8N4M1 653 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 FGF13Q92913 245 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 PYM1Q9BRP8 204 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 BLZF1Q9H2G9 400 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 RBAKQ9NYW8 714 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 UBE4BO95155 1302 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 CYP11A1P05108 521 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 AVPR2P30518 371 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 EHHADHQ08426 723 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 SLC5A9Q2M3M2 681 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 IER5LQ5T953 404 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 GPD1LQ8N335 351 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 PRSS33Q8NF86 280 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 NOC3LQ8WTT2 800 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 LEO1Q8WVC0 666 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 ING5Q8WYH8 240 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 BORCS6Q96GS4 357 aa12.07□□□□□ -0.48
TRAPPC4-204ENST00000524797 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms