RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 GM2AP17900 193 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 NPTX2P47972 431 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 RASA2Q15283 850 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
PTPRK-217ENST00000524534 AOC3Q16853 763 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 TEX9Q8N6V9 391 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 ENDOVQ8N8Q3 282 aaKnown RBP12.19□□□□□ -0.46
PTPRK-217ENST00000524534 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-217ENST00000524534 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 TBC1D10AQ9BXI6 508 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 KIF9Q9HAQ2 790 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 SLC24A3Q9HC58 644 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 CYLDQ9NQC7 956 aa12.19□□□□□ -0.46
PTPRK-217ENST00000524534 NFASCO94856 1347 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 CLGNO14967 610 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 LIASO43766 372 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 TYROBPO43914 113 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 RPA3P35244 121 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 CCNHP51946 323 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 BPIFB4P59827 614 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 CMPK2Q5EBM0 449 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 WASHC2DQ5SRD0 308 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 DRICH1Q6PGQ1 229 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 C15orf39Q6ZRI6 1047 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 GLIS1Q8NBF1 620 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 LRRC8CQ8TDW0 803 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 MICAL1Q8TDZ2 1067 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 SH3TC2Q8TF17 1288 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 SMC6Q96SB8 1091 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 TMX4Q9H1E5 349 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 DENND3A2RUS2 1198 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 ECE2O60344 883 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 CD58P19256 250 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 DSG3P32926 999 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 IRX1P78414 480 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 MRPS9P82933 396 aaKnown RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 MAMLD1Q13495 774 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 LIN9Q5TKA1 542 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 LONP2Q86WA8 852 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 TLE6Q9H808 572 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 C1orf112Q9NSG2 853 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 ANKEF1Q9NU02 776 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 TBC1D22BQ9NU19 505 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 FBXO28Q9NVF7 368 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 FEM1BQ9UK73 627 aa12.18□□□□□ -0.46
PTPRK-217ENST00000524534 RPL26L1Q9UNX3 145 aaKnown RBP12.18□□□□□ -0.46
PTPRK-217ENST00000524534 ZNF646O15015 1829 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 SCN9AQ15858 1988 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 POC1B-GALNT4F8VUJ3 575 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 ALOX15BO15296 676 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 PECAM1P16284 738 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 KRT15P19012 456 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 RASSF2P50749 326 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 PSMC5P62195 406 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 DMP1Q13316 513 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 FASTKD3Q14CZ7 662 aaKnown RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 SLC45A4Q5BKX6 768 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 XKR9Q5GH70 373 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 PLA2G4FQ68DD2 849 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 PLEKHA7Q6IQ23 1121 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 GPD1LQ8N335 351 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 SPIRE2Q8WWL2 714 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 POMGNT1Q8WZA1 660 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 PPCSQ9HAB8 311 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 DNPEPQ9ULA0 475 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 ZMYND8Q9ULU4 1186 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 FGFR1P11362 822 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 GCKP35557 465 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 RAD23BP54727 409 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 NOMO3P69849 1222 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 MORF4L2Q15014 288 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 OTOAQ7RTW8 1153 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 ALLCQ8N6M5 410 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 BSNDQ8WZ55 320 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 C11orf70Q9BRQ4 267 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 SSU72Q9NP77 194 aaKnown RBP12.17□□□□□ -0.46
PTPRK-217ENST00000524534 KMT5AQ9NQR1 393 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 ZFATQ9P243 1243 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 SLC24A2Q9UI40 661 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms