RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 MYO1FO00160 1098 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 NRP1O14786 923 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 FRS3O43559 492 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 NBNO60934 754 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 STT3AP46977 705 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 HMGA2P52926 109 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 RAP2BP61225 183 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 FMO1Q01740 532 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 ZNF543Q08ER8 600 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 SP140Q13342 867 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 TRIM14Q14142 442 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 CNGA2Q16280 664 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 C3orf38Q5JPI3 329 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 FAM209BQ5JX69 171 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 KLHDC7AQ5VTJ3 777 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 PDZD4Q76G19 769 aaPredicted RBP7.13□□□□□ -1.27
SKP1-213ENST00000524288 UBE3BQ7Z3V4 1068 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 ADGRE4PQ86SQ3 457 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 FAM90A1Q86YD7 464 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 PLXDC1Q8IUK5 500 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 SLC35B2Q8TB61 432 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 CASKIN2Q8WXE0 1202 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 CRB3Q9BUF7 120 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 KCNH6Q9H252 994 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 IL23AQ9NPF7 189 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 SACM1LQ9NTJ5 587 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 AURKAIP1Q9NWT8 199 aaPredicted RBP7.13□□□□□ -1.27
SKP1-213ENST00000524288 PLA2G3Q9NZ20 509 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 SLC23A1Q9UHI7 598 aa7.13□□□□□ -1.27
SKP1-213ENST00000524288 KCNJ5P48544 419 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 PIK3CGP48736 1102 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 HHEXQ03014 270 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 NRN1LQ496H8 165 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 USP39Q53GS9 565 aaKnown RBP7.12□□□□□ -1.27
SKP1-213ENST00000524288 ANKS6Q68DC2 871 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 XYLT1Q86Y38 959 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 DEPTORQ8TB45 409 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 ZNF503Q96F45 646 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 MRI1Q9BV20 369 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 ZNF341Q9BYN7 854 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 PCED1AQ9H1Q7 454 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 PIH1D1Q9NWS0 290 aaKnown RBP7.12□□□□□ -1.27
SKP1-213ENST00000524288 MOCS1Q9NZB8 636 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 PCDHGB2Q9Y5G2 931 aa7.12□□□□□ -1.27
SKP1-213ENST00000524288 UBE2QL1A1L167 161 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 CXorf49A8MYA2 514 aaPredicted RBP7.11□□□□□ -1.27
SKP1-213ENST00000524288 MATN4O95460 622 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 SLPIP03973 132 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 TSHRP16473 764 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 ATP5JP18859 108 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 ACRV1P26436 265 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 FLT3LGP49771 235 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 GZMKP49863 264 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 NPEPPSP55786 919 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 NOMO3P69849 1222 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 FOXL1Q12952 345 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 RIN1Q13671 783 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 ZRSR2Q15696 482 aaKnown RBP7.11□□□□□ -1.27
SKP1-213ENST00000524288 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 CCDC93Q567U6 631 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 ZNF529Q6P280 563 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 PNPLA8Q9NP80 782 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 GJB4Q9NTQ9 266 aa7.11□□□□□ -1.27
SKP1-213ENST00000524288 FTH1P19P0C7X4 201 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 SLC6A4P31645 630 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 MSX2P35548 267 aaPredicted RBP7.1□□□□□ -1.27
SKP1-213ENST00000524288 MAPK10P53779 464 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 PSMC1P62191 440 aaKnown RBP7.1□□□□□ -1.27
SKP1-213ENST00000524288 PMS2P11Q13670 270 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 GRM7Q14831 915 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 TUBB8Q3ZCM7 444 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 PABPC1LQ4VXU2 614 aaKnown RBP7.1□□□□□ -1.27
SKP1-213ENST00000524288 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
SKP1-213ENST00000524288 FAM47AQ5JRC9 791 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 ZFPM1Q8IX07 1006 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 GPR135Q8IZ08 494 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 SHCBP1Q8NEM2 672 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 RABGGTAQ92696 567 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 ARL8AQ96BM9 186 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 MPHOSPH9Q99550 1183 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 MRIQ9BWK5 157 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 ENKD1Q9H0I2 346 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 ARFGAP3Q9NP61 516 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 TRMT13Q9NUP7 481 aaKnown RBP7.1□□□□□ -1.27
SKP1-213ENST00000524288 SLC45A2Q9UMX9 530 aa7.1□□□□□ -1.27
SKP1-213ENST00000524288 A0A1W2PRX2 142 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 CYP27B1O15528 508 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 TEX33O43247 280 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 GNAI3P08754 354 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 PARP1P09874 1014 aaKnown RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 PPM1AP35813 382 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 IL6STP40189 918 aaPredicted RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 RPS16P62249 146 aaKnown RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 GNAI1P63096 354 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 PTH1RQ03431 593 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 DAG1Q14118 895 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 ATP2B3Q16720 1220 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 C4orf46Q504U0 113 aa7.09□□□□□ -1.27
SKP1-213ENST00000524288 HIBCHQ6NVY1 386 aaPredicted RBP7.09□□□□□ -1.27
SKP1-213ENST00000524288 DPP9Q86TI2 863 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms