RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PAX3P23760 479 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 SMAD4Q13485 552 aaKnown RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 SURF1Q15526 300 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 SMAD2Q15796 467 aaKnown RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 AAK1Q2M2I8 961 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 PTCRAQ6ISU1 281 aaPredicted RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 ANKS3Q6ZW76 656 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 WDR49Q8IV35 697 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 C12orf76Q8N812 135 aaPredicted RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 CCDC47Q96A33 483 aaKnown RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 MTMR12Q9C0I1 747 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 RMND1Q9NWS8 449 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 NUB1Q9Y5A7 615 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 LRRIQ3A6PVS8 624 aaPredicted RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 MAPK13O15264 365 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 EXOC3O60645 756 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 ABLIM3O94929 683 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 VNN2O95498 520 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 ITGB3P05106 788 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 POLR2BP30876 1174 aaKnown RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 MCM4P33991 863 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 OR1D2P34982 312 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 DLG4P78352 724 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 CREMQ03060 361 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 PDXDC1Q6P996 788 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 EP400NLQ6ZTU2 488 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 TRAPPC11Q7Z392 1133 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 LRRC52Q8N7C0 313 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 CMASQ8NFW8 434 aaPredicted RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 HDAC7Q8WUI4 952 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 CACTINQ8WUQ7 758 aaKnown RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 MED15Q96RN5 788 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 CD320Q9NPF0 282 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 DZANK1Q9NVP4 752 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 FBXW11Q9UKB1 542 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 AGAP1Q9UPQ3 857 aa12.91□□□□□ -0.34
CLN8-207ENST00000524258 USP15Q9Y4E8 981 aaPredicted RBP12.91□□□□□ -0.34
CLN8-207ENST00000524258 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 KIF20AO95235 890 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 GLUD1P00367 558 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 C4BPAP04003 597 aaKnown RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 SPATA31D3P0C874 917 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 CA8P35219 290 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 TAF6P49848 677 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 ROR1Q01973 937 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 DUOXA2Q1HG44 320 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 SPATA31D4Q6ZUB0 917 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 GLYCTKQ8IVS8 523 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 APPL2Q8NEU8 664 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 GPT2Q8TD30 523 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 NECAB3Q96P71 396 aaPredicted RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 GTPBP4Q9BZE4 634 aaKnown RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 ADAM7Q9H2U9 754 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 MAN1C1Q9NR34 630 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 GDAP2Q9NXN4 497 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
CLN8-207ENST00000524258 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 PLXNA3P51805 1871 aa12.9□□□□□ -0.34
CLN8-207ENST00000524258 WDR27A2RRH5 827 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 RFPL2O75678 378 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 VNN1O95497 513 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
CLN8-207ENST00000524258 NR2F2P24468 414 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 CCNE1P24864 410 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 RBP5P82980 135 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 ENPEPQ07075 957 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 ADAM9Q13443 819 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 CAMK4Q16566 473 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 TDRD10Q5VZ19 366 aaKnown RBP12.89□□□□□ -0.35
CLN8-207ENST00000524258 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 TTI2Q6NXR4 508 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 FOXR2Q6PJQ5 311 aa12.89□□□□□ -0.35
CLN8-207ENST00000524258 GPR149Q86SP6 731 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms