RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 HOXA6P31267 233 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 RAP1GAPP47736 663 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 PLD1Q13393 1074 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 NAB2Q15742 525 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 UPP1Q16831 310 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 ZNF280DQ6N043 979 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-216ENST00000523952 MCPH1Q8NEM0 835 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 DEPTORQ8TB45 409 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 TRPV4Q9HBA0 871 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 GOLGA2P5Q9HBQ8 144 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 TOPORSQ9NS56 1045 aaPredicted RBP10.23□□□□□ -0.77
PTPN12-216ENST00000523952 SLC38A7Q9NVC3 462 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 PCDHA12Q9UN75 941 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 PKD1L2Q7Z442 2459 aa10.23□□□□□ -0.77
PTPN12-216ENST00000523952 PCNX2A6NKB5 2137 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 DSPP15924 2871 aaKnown RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 A0A1W2PRU2 124 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 MYBPHLA2RUH7 354 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 SRRM3A6NNA2 597 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 M0R2N6 131 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 NRG2O14511 850 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 GIPC1O14908 333 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 SYN3O14994 580 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 AKAP3O75969 853 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 SEC24AO95486 1093 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 PSMA5P28066 241 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 MARCKSP29966 332 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 GBP1P32455 592 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 MCM4P33991 863 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 RARRES1P49788 294 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 EPHB3P54753 998 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 FAM187BQ17R55 369 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 ARHGAP15Q53QZ3 475 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 SH3PXD2AQ5TCZ1 1133 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 TCEAL6Q6IPX3 200 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 LRSAM1Q6UWE0 723 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 PIK3AP1Q6ZUJ8 805 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 APPL2Q8NEU8 664 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 PIGOQ8TEQ8 1089 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 HAS1Q92839 578 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 TCEAL3Q969E4 200 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 ZFYVE19Q96K21 471 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 PPP1R10Q96QC0 940 aaKnown RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 CCDC94Q9BW85 323 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 FZD8Q9H461 694 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 GPRC5CQ9NQ84 441 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 C2orf42Q9NWW7 574 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 THG1LQ9NWX6 298 aaKnown RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 GTSE1Q9NYZ3 720 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 AFF4Q9UHB7 1163 aaKnown RBP10.22□□□□□ -0.77
PTPN12-216ENST00000523952 FBXL5Q9UKA1 691 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 MAFFQ9ULX9 164 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
PTPN12-216ENST00000523952 GCN1Q92616 2671 aaKnown RBP10.21□□□□□ -0.77
PTPN12-216ENST00000523952 TSC2P49815 1807 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ARNTLO00327 626 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ACKR2O00590 384 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 PODXLO00592 558 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 EXTL3O43909 919 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 CAVIN2O95810 425 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 RPS6KB1P23443 525 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ALDH1A3P47895 512 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 PLCB2Q00722 1185 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 RING1Q06587 406 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 FCHO2Q0JRZ9 810 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 GRSF1Q12849 480 aaKnown RBP eCLIP10.21□□□□□ -0.773e-13■■■■□ 20
PTPN12-216ENST00000523952 KARSQ15046 597 aaKnown RBP10.21□□□□□ -0.77
PTPN12-216ENST00000523952 PPP2R5AQ15172 486 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 CALCRLQ16602 461 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 UAP1L1Q3KQV9 507 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ITPRIPL2Q3MIP1 535 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 CDCA2Q69YH5 1023 aaPredicted RBP10.21□□□□□ -0.77
PTPN12-216ENST00000523952 TXNDC11Q6PKC3 985 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ARID3BQ8IVW6 561 aaPredicted RBP10.21□□□□□ -0.77
PTPN12-216ENST00000523952 C3orf58Q8NDZ4 430 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 SHKBP1Q8TBC3 707 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 EXOC4Q96A65 974 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ZC3H10Q96K80 434 aaKnown RBP10.21□□□□□ -0.77
PTPN12-216ENST00000523952 IFT74Q96LB3 600 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 SCNM1Q9BWG6 230 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 ATXN3LQ9H3M9 355 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 TMEM9BQ9NQ34 198 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 CEP72Q9P209 647 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 TPCN1Q9ULQ1 816 aa10.21□□□□□ -0.77
PTPN12-216ENST00000523952 SPEGQ15772 3267 aa10.21□□□□□ -0.78
PTPN12-216ENST00000523952 ANAPC1Q9H1A4 1944 aa10.21□□□□□ -0.78
PTPN12-216ENST00000523952 PLXND1Q9Y4D7 1925 aa10.21□□□□□ -0.78
PTPN12-216ENST00000523952 SMIM28A0A1B0GU29 152 aa10.2□□□□□ -0.78
PTPN12-216ENST00000523952 NCANO14594 1321 aa10.2□□□□□ -0.78
PTPN12-216ENST00000523952 KHNYNO15037 678 aaKnown RBP10.2□□□□□ -0.78
PTPN12-216ENST00000523952 LYPLA2O95372 231 aa10.2□□□□□ -0.78
PTPN12-216ENST00000523952 FGF19O95750 216 aa10.2□□□□□ -0.78
PTPN12-216ENST00000523952 CEACAM1P13688 526 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms