RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 LTBRP36941 435 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 PPP1R2P41236 205 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 FKBP3Q00688 224 aaKnown RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 TFF2Q03403 129 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 LRRC63Q05C16 580 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 ADAM15Q13444 863 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 CLUL1Q15846 466 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 CCDC183Q5T5S1 534 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 TDRD10Q5VZ19 366 aaKnown RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 RBM43Q6ZSC3 357 aaKnown RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 PALB2Q86YC2 1186 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 EFHBQ8N7U6 833 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 TMC2Q8TDI7 906 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 SLC22A17Q8WUG5 538 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 PABPC5Q96DU9 382 aaKnown RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 BORCS6Q96GS4 357 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 SENP8Q96LD8 212 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 CLSTN3Q9BQT9 956 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 EMILIN2Q9BXX0 1053 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 UBE2ZQ9H832 354 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 HCFC2Q9Y5Z7 792 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 MYH10P35580 1976 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-224ENST00000523873 SYN3O14994 580 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 MAPK13O15264 365 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 C4BPAP04003 597 aaKnown RBP13.82□□□□□ -0.2
VEGFA-224ENST00000523873 SPATA31D3P0C874 917 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
VEGFA-224ENST00000523873 KRT13P13646 458 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 KCNA5P22460 613 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 NDUFV1P49821 464 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 RBP5P82980 135 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 PPP3CAQ08209 521 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 BIRC3Q13489 604 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 KCNC3Q14003 757 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 SV2CQ496J9 727 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 SPATA31D4Q6ZUB0 917 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 HLA-CQ95604 372 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 APOL5Q9BWW9 433 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■■□□□ 14
VEGFA-224ENST00000523873 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 PTPRDP23468 1912 aa13.82□□□□□ -0.2
VEGFA-224ENST00000523873 KPNA7A9QM74 516 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CYB561D2O14569 222 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 PHACTR2O75167 634 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 VNN1O95497 513 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 GCLMP48507 274 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CLCN4P51793 760 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CDR1P51861 262 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 ARPP19P56211 112 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 MYL6P60660 151 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CLDN10P78369 228 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 COL19A1Q14993 1142 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CTXN3Q4LDR2 81 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 DCAF17Q5H9S7 520 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-224ENST00000523873 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
VEGFA-224ENST00000523873 MLKLQ8NB16 471 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 HPDLQ96IR7 371 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CDCA3Q99618 268 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-224ENST00000523873 SRRTQ9BXP5 876 aaKnown RBP13.81□□□□□ -0.2
VEGFA-224ENST00000523873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CLEC1BQ9P126 229 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 FNIP2Q9P278 1114 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 THEGQ9P2T0 379 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 CDY1Q9Y6F8 540 aa13.81□□□□□ -0.2
VEGFA-224ENST00000523873 DENND4AQ7Z401 1863 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 EYSQ5T1H1 3165 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.8□□□□□ -0.2
VEGFA-224ENST00000523873 SLC16A3O15427 465 aaKnown RBP13.8□□□□□ -0.2
VEGFA-224ENST00000523873 TGM5O43548 720 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 HCRTO43612 131 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 LRRN2O75325 713 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 CLSTN1O94985 981 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 ADH1AP07327 375 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 OR4Q2P0C623 313 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 ODC1P11926 461 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 OR1D2P34982 312 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 PNPLA4P41247 253 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 TRPC3Q13507 836 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 MRPL58Q14197 206 aaKnown RBP13.8□□□□□ -0.2
VEGFA-224ENST00000523873 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 TCERG1LQ5VWI1 586 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 ANKS3Q6ZW76 656 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 SV2AQ7L0J3 742 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 LRRC52Q8N7C0 313 aa13.8□□□□□ -0.2
VEGFA-224ENST00000523873 C12orf76Q8N812 135 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms