RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 RCN2Q14257 317 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 PIGHQ14442 188 aaPredicted RBP13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 SH2D3CQ8N5H7 860 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 ETNPPLQ8TBG4 499 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 MTMR8Q96EF0 704 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 CYFIP2Q96F07 1278 aa13.8□□□□□ -0.2
PCDHGB1-201ENST00000523390 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 LRRC10BA6NIK2 292 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 H3BRJ5 948 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 UPP2O95045 317 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 XPAP23025 273 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 MYBPC2Q14324 1141 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 RRM1P23921 792 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 SULT1E1P49888 294 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 ECM1Q16610 540 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 GOLGA7BQ2TAP0 167 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 COPS5Q92905 334 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 CLMNQ96JQ2 1002 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 ELAC2Q9BQ52 826 aaKnown RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 ASTN2O75129 1339 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 BRAFP15056 766 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 THPOP40225 353 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 PID1Q7Z2X4 250 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 ANKMY2Q8IV38 441 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 SPON2Q9BUD6 331 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 CARD9Q9H257 536 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 DNAJC18Q9H819 358 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
PCDHGB1-201ENST00000523390 ANKRD63C9JTQ0 380 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 APOL1O14791 398 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 GNL1P36915 607 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 GRIK1P39086 918 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 FCGRTP55899 365 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 SPIRE2Q8WWL2 714 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 CST8O60676 142 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 CDKL3Q8IVW4 592 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 UBQLN1Q9UMX0 589 aaKnown RBP13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 KCNN4O15554 427 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 SPATA31C1P0DKV0 1188 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 RALAP11233 206 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 P3H1Q32P28 736 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 REPS2Q8NFH8 660 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 PNKPQ96T60 521 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 TADA2AO75478 443 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 GPC4O75487 556 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 PCK1P35558 622 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 ADCYAP1R1P41586 468 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 RAP1GAPP47736 663 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 TAF6P49848 677 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 SV2CQ496J9 727 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 ATP6V1G3Q96LB4 118 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 TTC25Q96NG3 672 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 PRDM5Q9NQX1 630 aaPredicted RBP13.78□□□□□ -0.2
PCDHGB1-201ENST00000523390 KBTBD13C9JR72 458 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 MAPTP10636 758 aaKnown RBP13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 ASPHQ12797 758 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 LRRC14Q15048 493 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 USP50Q70EL3 339 aaPredicted RBP13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 MYLK4Q86YV6 388 aaPredicted RBP13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 PDCD6IPQ8WUM4 868 aaKnown RBP13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 HDAC11Q96DB2 347 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 CISHQ9NSE2 258 aa13.77□□□□□ -0.2
PCDHGB1-201ENST00000523390 COPEO14579 308 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 TRAPPC3O43617 180 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 ADCY3O60266 1144 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 PAN2Q504Q3 1202 aaKnown RBP13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 DCAF6Q58WW2 860 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 PPP1R13LQ8WUF5 828 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 KLRG1Q96E93 195 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZSWIM1Q9BR11 485 aa13.77□□□□□ -0.21
PCDHGB1-201ENST00000523390 G3BP2Q9UN86 482 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms