RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 A0A0U1RQF3 1178 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 GSTTP1A0A1W2PQM5 241 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 KLRF2D3W0D1 207 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 H0Y626 953 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 DDX39AO00148 427 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 CCL16O15467 120 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 ARHGAP6O43182 974 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 PAX4O43316 350 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 TGM5O43548 720 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 HBP1O60381 514 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 RHOBTB1O94844 696 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 EPN2O95208 641 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 TRIM16O95361 564 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 CAVIN2O95810 425 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SOD2P04179 222 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 PRB1P04280 392 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 NEFLP07196 543 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SNHG28P0DPA3 235 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 GSPT1P15170 499 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 SFPQP23246 707 aaKnown RBP eCLIP4.28□□□□□ -1.72
NPM1-210ENST00000523339 EIF4BP23588 611 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 CCNE1P24864 410 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 CDC27P30260 824 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 MAPK8P45983 427 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SLC11A1P49279 550 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SLC26A2P50443 739 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 NLRP11P59045 1033 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 NTHL1P78549 312 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 FAM189BP81408 668 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 MRPS9P82933 396 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 NUCB1Q02818 461 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 GRM2Q14416 872 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 WTAPQ15007 396 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 PABPC1LQ4VXU2 614 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 ZNF484Q5JVG2 852 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 PCNX4Q63HM2 1172 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 LARP1BQ659C4 914 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 ACAD11Q709F0 780 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 PLPPR4Q7Z2D5 763 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 DGKHQ86XP1 1220 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 DTX1Q86Y01 620 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SPEM1Q8N4L4 309 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 HDDC3Q8N4P3 179 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 HDAC7Q8WUI4 952 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 DNASE1L2Q92874 299 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 LPPQ93052 612 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 GPRASP2Q96D09 838 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 MCRS1Q96EZ8 462 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 ZNF668Q96K58 619 aaPredicted RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 HNRNPABQ99729 332 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 TRMT61BQ9BVS5 477 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 LNPKQ9C0E8 428 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 IL25Q9H293 177 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 NRDE2Q9H7Z3 1164 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.28□□□□□ -1.72
NPM1-210ENST00000523339 TBC1D13Q9NVG8 400 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 KANSL3Q9P2N6 904 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 DNAJB4Q9UDY4 337 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SEC63Q9UGP8 760 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 CEP131Q9UPN4 1083 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 SLC8A2Q9UPR5 921 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 PIN4Q9Y237 131 aaKnown RBP4.28□□□□□ -1.72
NPM1-210ENST00000523339 ATG2AQ2TAZ0 1938 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 PLXNA4Q9HCM2 1894 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 NAV2Q8IVL1 2488 aa4.28□□□□□ -1.72
NPM1-210ENST00000523339 ARID1BQ8NFD5 2236 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 HELZ2Q9BYK8 2649 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 MYH7BA7E2Y1 1941 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 SPAARA0A1B0GVQ0 90 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 J3QKU1 62 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ZNF213O14771 459 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ZNF263O14978 683 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 DHX15O43143 795 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 ATP9AO75110 1047 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ECI2O75521 394 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 KIF4AO95239 1232 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 POMCP01189 267 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 C8AP07357 584 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 PCP11498 1178 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 PLA2G2AP14555 144 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 CSRP1P21291 193 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 FGFR4P22455 802 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 BRD2P25440 801 aaKnown RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 GDI1P31150 447 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ZNF76P36508 570 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 TXKP42681 527 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 NOVP48745 357 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 PXNP49023 591 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 RAB27AP51159 221 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 CLCN3P51790 818 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 ACTR2P61160 394 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 SCAPQ12770 1279 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 MIS18BP1Q6P0N0 1132 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 C1orf228Q6PIY5 440 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 NFXL1Q6ZNB6 911 aa4.27□□□□□ -1.73
NPM1-210ENST00000523339 CENPQQ7L2Z9 268 aaPredicted RBP4.27□□□□□ -1.73
NPM1-210ENST00000523339 KBTBD6Q86V97 674 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms