RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 ZNF516Q92618 1163 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
DENND3-220ENST00000523066 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 UHRF1Q96T88 793 aaPredicted RBP11.36□□□□□ -0.59
DENND3-220ENST00000523066 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 FNIP2Q9P278 1114 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 MTRRQ9UBK8 725 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 CDY1Q9Y6F8 540 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 DENND4AQ7Z401 1863 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 M0QZQ0 153 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 DLL1O00548 723 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 KIAA0391O15091 583 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 EXOC3O60645 756 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 KINO60870 393 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 GLUD1P00367 558 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 NR3C1P04150 777 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 SRGAP2BP0DMP2 458 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 DLATP10515 647 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 SP100P23497 879 aaPredicted RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 POLR2BP30876 1174 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 PRCPP42785 496 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 AARSP49588 968 aaKnown RBP eCLIP11.35□□□□□ -0.59
DENND3-220ENST00000523066 LILRA4P59901 499 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 UBE2HP62256 183 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 POU5F1Q01860 360 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 CYP24A1Q07973 514 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 MRPL58Q14197 206 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 SMAD2Q15796 467 aaKnown RBP11.35□□□□□ -0.59
DENND3-220ENST00000523066 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 C12orf56Q8IXR9 622 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 CSGALNACT2Q8N6G5 542 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 SPATA20Q8TB22 786 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 ELMO3Q96BJ8 720 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 CCDC127Q96BQ5 260 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 EEF2KMTQ96G04 330 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 BORCS6Q96GS4 357 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 SENP8Q96LD8 212 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 TSPAN18Q96SJ8 248 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.35□□□□□ -0.59
DENND3-220ENST00000523066 INTS13Q9NVM9 706 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 DMAC2Q9NW81 257 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 SIX4Q9UIU6 781 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 FBXL5Q9UKA1 691 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 MAN1B1Q9UKM7 699 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 AGAP1Q9UPQ3 857 aa11.35□□□□□ -0.59
DENND3-220ENST00000523066 FSD2A1L4K1 749 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 WDR27A2RRH5 827 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 BIN1O00499 593 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 PDXKO00764 312 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 SYN3O14994 580 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 KRT19P08727 400 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 OR4Q2P0C623 313 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 TMEM191BP0C7N4 346 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 BMP6P22004 513 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
DENND3-220ENST00000523066 SNRPFP62306 86 aaKnown RBP11.34□□□□□ -0.59
DENND3-220ENST00000523066 DLG4P78352 724 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 ROR1Q01973 937 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 CAMK2BQ13554 666 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 PSMD6Q15008 389 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 CAMK4Q16566 473 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 CTXN3Q4LDR2 81 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 ZNF658Q5TYW1 1059 aaPredicted RBP11.34□□□□□ -0.59
DENND3-220ENST00000523066 CEP135Q66GS9 1140 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 ANKS3Q6ZW76 656 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 NT5DC4Q86YG4 428 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 GPR65Q8IYL9 337 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 GUF1Q8N442 669 aaKnown RBP11.34□□□□□ -0.59
DENND3-220ENST00000523066 KREMEN2Q8NCW0 462 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 SUSD6Q92537 303 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 KHSRPQ92945 711 aaKnown RBP eCLIP11.34□□□□□ -0.59
DENND3-220ENST00000523066 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 FBXW11Q9UKB1 542 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 TRAF3IP3Q9Y228 551 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 BACE2Q9Y5Z0 518 aa11.34□□□□□ -0.59
DENND3-220ENST00000523066 NOTCH4Q99466 2003 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 CCDC195A0A1B0GUA6 201 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 TRIM49BA6NDI0 452 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
DENND3-220ENST00000523066 CYB561D2O14569 222 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 HCRTO43612 131 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
DENND3-220ENST00000523066 SMC2O95347 1197 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 CST3P01034 146 aaPredicted RBP11.33□□□□□ -0.6
DENND3-220ENST00000523066 HOXB8P17481 243 aaPredicted RBP11.33□□□□□ -0.6
DENND3-220ENST00000523066 TNNI1P19237 187 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 TAF6P49848 677 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 CREMQ03060 361 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 YWHAHQ04917 246 aaPredicted RBP11.33□□□□□ -0.6
DENND3-220ENST00000523066 ZP2Q05996 745 aa11.33□□□□□ -0.6
DENND3-220ENST00000523066 BFSP1Q12934 665 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms