RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 TMEM175Q9BSA9 504 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 GOLGA2P5Q9HBQ8 144 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 RTN4Q9NQC3 1192 aaKnown RBP12.86□□□□□ -0.35
PVT1-215ENST00000522963 SLC38A7Q9NVC3 462 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 IFNKQ9P0W0 207 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 CHD7Q9P2D1 2997 aa12.86□□□□□ -0.35
PVT1-215ENST00000522963 F8W810 466 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 PPEF2O14830 753 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 PER2O15055 1255 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 PMM2O15305 246 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 TEX33O43247 280 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
PVT1-215ENST00000522963 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
PVT1-215ENST00000522963 VNN1O95497 513 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 LRPAP1P30533 357 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.35
PVT1-215ENST00000522963 NRIP1P48552 1158 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 UBASH3AP57075 661 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 MYL7Q01449 175 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 DSC1Q08554 894 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 TUSC3Q13454 348 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 BIRC3Q13489 604 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 SARM1Q6SZW1 724 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 SEMA4DQ92854 862 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 COLEC11Q9BWP8 271 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 LZTS1Q9Y250 596 aa12.85□□□□□ -0.35
PVT1-215ENST00000522963 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 P4HA2O15460 535 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 PHACTR2O75167 634 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 LRRN2O75325 713 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 CXCL14O95715 111 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 CST3P01034 146 aaPredicted RBP12.84□□□□□ -0.35
PVT1-215ENST00000522963 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 ITGB3P05106 788 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
PVT1-215ENST00000522963 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
PVT1-215ENST00000522963 TFF2Q03403 129 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 UBXN1Q04323 297 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 GSE1Q14687 1217 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
PVT1-215ENST00000522963 NR1I3Q14994 352 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 C9orf57Q5W0N0 161 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 DDX53Q86TM3 631 aaKnown RBP12.84□□□□□ -0.35
PVT1-215ENST00000522963 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
PVT1-215ENST00000522963 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 HLA-CQ95604 372 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 PAAF1Q9BRP4 392 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 CRACR2AQ9BSW2 395 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
PVT1-215ENST00000522963 TLE6Q9H808 572 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 CLDND1Q9NY35 253 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 AGAP1Q9UPQ3 857 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 COQ4Q9Y3A0 265 aa12.84□□□□□ -0.35
PVT1-215ENST00000522963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
PVT1-215ENST00000522963 GTPBP10A4D1E9 387 aaKnown RBP12.83□□□□□ -0.36
PVT1-215ENST00000522963 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 PODXLO00592 558 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 PIRO00625 290 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 C2CD2LO14523 706 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 FSCN2O14926 492 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 TADA2AO75478 443 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 KRT19P08727 400 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 KCNA5P22460 613 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 PIK3CAP42336 1068 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 CLCNKBP51801 687 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 MYL6P60660 151 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 RBP5P82980 135 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 KCNMA1Q12791 1236 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 HYAL1Q12794 435 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 TRPC3Q13507 836 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 NCOA4Q13772 614 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 SMC1AQ14683 1233 aaKnown RBP12.83□□□□□ -0.36
PVT1-215ENST00000522963 PTPN21Q16825 1174 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 GBP6Q6ZN66 633 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 LMO3Q8TAP4 145 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 RAB20Q9NX57 234 aa12.83□□□□□ -0.36
PVT1-215ENST00000522963 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
PVT1-215ENST00000522963 TCF20Q9UGU0 1960 aaKnown RBP12.83□□□□□ -0.36
PVT1-215ENST00000522963 LINC01565O15544 149 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 CBFA2T2O43439 604 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 SLC9A1P19634 815 aa12.82□□□□□ -0.36
PVT1-215ENST00000522963 RPL9P32969 192 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms