RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SIX4Q9UIU6 781 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 BACE2Q9Y5Z0 518 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 CCDC195A0A1B0GUA6 201 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 LOC730098B7Z3J9 87 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 ITGB3P05106 788 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 POLR2BP30876 1174 aaKnown RBP19.31■□□□□ 0.68
CLK4-211ENST00000522556 SNRNP35Q16560 246 aaKnown RBP19.31■□□□□ 0.68
CLK4-211ENST00000522556 CTXN3Q4LDR2 81 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 CES5AQ6NT32 575 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 BORCS6Q96GS4 357 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 SENP8Q96LD8 212 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 TMEM209Q96SK2 561 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 POP1Q99575 1024 aaKnown RBP19.31■□□□□ 0.68
CLK4-211ENST00000522556 EPHX3Q9H6B9 360 aa19.31■□□□□ 0.68
CLK4-211ENST00000522556 ZNF233A6NK53 670 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 ZMYND10O75800 440 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 C8AP07357 584 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 CASP4P49662 377 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 CYP24A1Q07973 514 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 PSMD2Q13200 908 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 SLC8B1Q6J4K2 584 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 PDXDC1Q6P996 788 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 DSTYKQ6XUX3 929 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 HS2ST1Q7LGA3 356 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 SLC7A14Q8TBB6 771 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 NOTCH4Q99466 2003 aa19.3■□□□□ 0.68
CLK4-211ENST00000522556 BDP1A6H8Y1 2624 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 C2CD4DB7Z1M9 353 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 KIAA0391O15091 583 aaKnown RBP19.29■□□□□ 0.68
CLK4-211ENST00000522556 VNN2O95498 520 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 NTHL1P78549 312 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 KCNB1Q14721 858 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 ZNF280DQ6N043 979 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 C12orf56Q8IXR9 622 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 XXYLT1Q8NBI6 393 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 CMASQ8NFW8 434 aaPredicted RBP19.29■□□□□ 0.68
CLK4-211ENST00000522556 SMG7Q92540 1137 aaKnown RBP19.29■□□□□ 0.68
CLK4-211ENST00000522556 CCDC127Q96BQ5 260 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 INTS13Q9NVM9 706 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 AGAP1Q9UPQ3 857 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 DOCK8Q8NF50 2099 aa19.29■□□□□ 0.68
CLK4-211ENST00000522556 CCL16O15467 120 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 N4BP1O75113 896 aaKnown RBP19.28■□□□□ 0.68
CLK4-211ENST00000522556 SEC24AO95486 1093 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 DLATP10515 647 aaKnown RBP19.28■□□□□ 0.68
CLK4-211ENST00000522556 MTHFRP42898 656 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 TAF6P49848 677 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 YWHAHQ04917 246 aaPredicted RBP19.28■□□□□ 0.68
CLK4-211ENST00000522556 NT5DC4Q86YG4 428 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 RNF135Q8IUD6 432 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 CSGALNACT2Q8N6G5 542 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 APPL2Q8NEU8 664 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 OR10T2Q8NGX3 314 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 RIPOR3Q96MK2 946 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 RTP3Q9BQQ7 232 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 CRISPLD1Q9H336 500 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 PLEKHA4Q9H4M7 779 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 DMAC2Q9NW81 257 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 MUTYHQ9UIF7 546 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 PCDHA5Q9Y5H7 936 aa19.28■□□□□ 0.68
CLK4-211ENST00000522556 H7C4K7 107 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 HCRTO43612 131 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 EXOC3O60645 756 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 ABLIM3O94929 683 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 OAZ2O95190 189 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 PAPLNO95428 1278 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 NR3C1P04150 777 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 KRT19P08727 400 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 TMEM191BP0C7N4 346 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 ODC1P11926 461 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 PSMD6Q15008 389 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 ATAT1Q5SQI0 421 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 WSCD1Q658N2 575 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 OVOS1Q6IE37 1185 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 RNF19BQ6ZMZ0 732 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 C15orf39Q6ZRI6 1047 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 TTC9BQ8N6N2 239 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 ELMO3Q96BJ8 720 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 CGRRF1Q99675 332 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 HCFC1R1Q9NWW0 138 aa19.27■□□□□ 0.68
CLK4-211ENST00000522556 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.27■□□□□ 0.68
CLK4-211ENST00000522556 CYB561D2O14569 222 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 CPB1P15086 417 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 TYMPP19971 482 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 SNRPFP62306 86 aaKnown RBP19.26■□□□□ 0.67
CLK4-211ENST00000522556 BFSP1Q12934 665 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 CCDC142Q17RM4 750 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 PPM1LQ5SGD2 360 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 LIN9Q5TKA1 542 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 ISM2Q6H9L7 571 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 WDR49Q8IV35 697 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 ZNF461Q8TAF7 563 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 HDAC7Q8WUI4 952 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 MFSD14AQ96MC6 490 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 NECTIN4Q96NY8 510 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 PGLYRP2Q96PD5 576 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 PRKD2Q9BZL6 878 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 KIAA1586Q9HCI6 787 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms