RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SCN1AP35498 2009 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 ANHXE9PGG2 379 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 PPEF2O14830 753 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 SEC24AO95486 1093 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 LDHAP00338 332 aaKnown RBP18.48■□□□□ 0.55
SQLE-205ENST00000521232 PDGFBP01127 241 aaPredicted RBP18.48■□□□□ 0.55
SQLE-205ENST00000521232 TYMPP19971 482 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
SQLE-205ENST00000521232 NT5DC4Q86YG4 428 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 SYCP3Q8IZU3 236 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 SLC44A3Q8N4M1 653 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 RSAD2Q8WXG1 361 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 C7orf25Q9BPX7 421 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 HCFC1R1Q9NWW0 138 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 AFF4Q9UHB7 1163 aaKnown RBP18.48■□□□□ 0.55
SQLE-205ENST00000521232 CDH7Q9ULB5 785 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 KCNH3Q9ULD8 1083 aa18.48■□□□□ 0.55
SQLE-205ENST00000521232 TIMM13Q9Y5L4 95 aaPredicted RBP18.48■□□□□ 0.55
SQLE-205ENST00000521232 PRRG1O14668 218 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 SPTLC1O15269 473 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 POLR2DO15514 142 aaKnown RBP18.47■□□□□ 0.55
SQLE-205ENST00000521232 PRPF6O94906 941 aaKnown RBP18.47■□□□□ 0.55
SQLE-205ENST00000521232 IL18RAPO95256 599 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 AVPR2P30518 371 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 ME1P48163 572 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 IER5LQ5T953 404 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 RESP18Q5W5W9 173 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 ITFG1Q8TB96 612 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 FGF13Q92913 245 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 SENP8Q96LD8 212 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 FAM213AQ9BRX8 229 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 MAGEF1Q9HAY2 307 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 CYP4F11Q9HBI6 524 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 AVENQ9NQS1 362 aaPredicted RBP18.47■□□□□ 0.55
SQLE-205ENST00000521232 DPP3Q9NY33 737 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 FAM13BQ9NYF5 915 aa18.47■□□□□ 0.55
SQLE-205ENST00000521232 KMT2EQ8IZD2 1858 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 LRG1P02750 347 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 PTPN2P17706 415 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 ADCY1Q08828 1119 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 HTR4Q13639 388 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 PABPC1LQ4VXU2 614 aaKnown RBP18.46■□□□□ 0.55
SQLE-205ENST00000521232 STXBP4Q6ZWJ1 553 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 USP37Q86T82 979 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 EFCAB13Q8IY85 973 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 ZSWIM2Q8NEG5 633 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 HPS3Q969F9 1004 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 PRRX2Q99811 253 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 INSL5Q9Y5Q6 135 aa18.46■□□□□ 0.55
SQLE-205ENST00000521232 OR6C75A6NL08 312 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 NARSO43776 548 aaKnown RBP18.45■□□□□ 0.54
SQLE-205ENST00000521232 EXTL3O43909 919 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 CYP11A1P05108 521 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 RHOP08100 348 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 VCPP55072 806 aaKnown RBP18.45■□□□□ 0.54
SQLE-205ENST00000521232 OVOS1Q6IE37 1185 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 RNF19BQ6ZMZ0 732 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 BRSK2Q8IWQ3 736 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 GLIS3Q8NEA6 775 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 ZNF507Q8TCN5 953 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 SAAL1Q96ER3 474 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 CBWD1Q9BRT8 395 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 WNT16Q9UBV4 365 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 ZDHHC9Q9Y397 364 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 PIEZO1Q92508 2521 aa18.45■□□□□ 0.54
SQLE-205ENST00000521232 CACNA1HO95180 2353 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 KIAA0391O15091 583 aaKnown RBP18.44■□□□□ 0.54
SQLE-205ENST00000521232 EIF3DO15371 548 aaKnown RBP eCLIP18.44■□□□□ 0.54
SQLE-205ENST00000521232 ODC1P11926 461 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 CPB1P15086 417 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 HOXD13P35453 343 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 NUBP1P53384 320 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 WNT7BP56706 349 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 ASIC1P78348 528 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 EHHADHQ08426 723 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 GPR17Q13304 367 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 MYBPC2Q14324 1141 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 UNC13DQ70J99 1090 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 EPM2AIP1Q7L775 607 aaPredicted RBP18.44■□□□□ 0.54
SQLE-205ENST00000521232 FGF14Q92915 247 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 BORCS6Q96GS4 357 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 PYM1Q9BRP8 204 aaKnown RBP18.44■□□□□ 0.54
SQLE-205ENST00000521232 RBAKQ9NYW8 714 aaPredicted RBP18.44■□□□□ 0.54
SQLE-205ENST00000521232 MRPS23Q9Y3D9 190 aaKnown RBP18.44■□□□□ 0.54
SQLE-205ENST00000521232 NUMBLQ9Y6R0 609 aa18.44■□□□□ 0.54
SQLE-205ENST00000521232 VNN2O95498 520 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 SRFP11831 508 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 TAF6P49848 677 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 CLCN5P51795 746 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 ARMCX5Q6P1M9 558 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 PARM1Q6UWI2 310 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 NPAS3Q8IXF0 933 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 GPD1LQ8N335 351 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 PRSS33Q8NF86 280 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 CACTINQ8WUQ7 758 aaKnown RBP18.43■□□□□ 0.54
SQLE-205ENST00000521232 RPP25Q9BUL9 199 aaKnown RBP18.43■□□□□ 0.54
SQLE-205ENST00000521232 PCIF1Q9H4Z3 704 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 DSEQ9UL01 958 aa18.43■□□□□ 0.54
SQLE-205ENST00000521232 PVALEFA0A1B0GWK0 134 aa18.42■□□□□ 0.54
SQLE-205ENST00000521232 GOLGA8IPA6NC78 632 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms