RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ZNF276Q8N554 614 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 NSUN7Q8NE18 718 aaKnown RBP6.45□□□□□ -1.38
SKP1-208ENST00000521216 TLR10Q9BXR5 811 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 RNPEPQ9H4A4 650 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.45□□□□□ -1.38
SKP1-208ENST00000521216 ZDHHC8Q9ULC8 765 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 MTO1Q9Y2Z2 717 aaKnown RBP6.45□□□□□ -1.38
SKP1-208ENST00000521216 PRSS29PA6NIE9 313 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 CAND2O75155 1236 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 NDUFA10O95299 355 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 GPANK1O95872 356 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 ZBED1O96006 694 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 ANXA1P04083 346 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 KRT18P05783 430 aaKnown RBP6.44□□□□□ -1.38
SKP1-208ENST00000521216 FGFR4P22455 802 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 CACNB3P54284 484 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 TBX4P57082 545 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 SLC25A3Q00325 362 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 SLFN5Q08AF3 891 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 KIF22Q14807 665 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 SWSAP1Q6NVH7 229 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 PDSS2Q86YH6 399 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 MAPKAPK5Q8IW41 473 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 PDPRQ8NCN5 879 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 PNKPQ96T60 521 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 KRTAP9-9Q9BYP9 154 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 AKIP1Q9NQ31 210 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 REXO2Q9Y3B8 237 aaKnown RBP6.44□□□□□ -1.38
SKP1-208ENST00000521216 CHST2Q9Y4C5 530 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 PCDHGB6Q9Y5F9 930 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 FPGT-TNNI3KV9GXZ4 949 aa6.44□□□□□ -1.38
SKP1-208ENST00000521216 CCDC78A2IDD5 438 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 RNASET2O00584 256 aaKnown RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 PHGDHO43175 533 aaKnown RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 INSRRP14616 1297 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 RHCEP18577 417 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 SLC7A1P30825 629 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 BUD31P41223 144 aaPredicted RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 RHDQ02161 417 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 ZNF844Q08AG5 666 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 GALEQ14376 348 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 COBLL1Q53SF7 1204 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 SLC30A10Q6XR72 485 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 SLC25A43Q8WUT9 341 aaPredicted RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 SCAMP4Q969E2 229 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 TTC17Q96AE7 1141 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 P2RX7Q99572 595 aaKnown RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 SLC46A2Q9BY10 475 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 ZNF341Q9BYN7 854 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 BHMT2Q9H2M3 363 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 ZNF703Q9H7S9 590 aaPredicted RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 RLIMQ9NVW2 624 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 PIH1D1Q9NWS0 290 aaKnown RBP6.43□□□□□ -1.38
SKP1-208ENST00000521216 RNF181Q9P0P0 153 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 HSFX1Q9UBD0 423 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 TPCN1Q9ULQ1 816 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 NCANO14594 1321 aa6.43□□□□□ -1.38
SKP1-208ENST00000521216 M0QYG6 137 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 GOLIM4O00461 696 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 VPS4BO75351 444 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 NPR1P16066 1061 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 FAM193AP78312 1265 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 MXRA7P84157 204 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 OCA2Q04671 838 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 FOXE3Q13461 319 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 SPDYE7PQ495Y7 208 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 CRB2Q5IJ48 1285 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 USP37Q86T82 979 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 CFAP52Q8N1V2 620 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 LRTOMTQ8WZ04 291 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 RNF31Q96EP0 1072 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 ATP6V0A4Q9HBG4 840 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 SLC2A4RGQ9NR83 387 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.42□□□□□ -1.38
SKP1-208ENST00000521216 AGAP1Q9UPQ3 857 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 NOX1Q9Y5S8 564 aa6.42□□□□□ -1.38
SKP1-208ENST00000521216 E9PLN8 166 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 POLRMTO00411 1230 aaKnown RBP6.41□□□□□ -1.38
SKP1-208ENST00000521216 MGEA5O60502 916 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 KIF20AO95235 890 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 MAP4K4O95819 1239 aaPredicted RBP6.41□□□□□ -1.38
SKP1-208ENST00000521216 HLA-DOAP06340 250 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 ELANEP08246 267 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 LAG3P18627 525 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 PEX2P28328 305 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 PIGFQ07326 219 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 RESTQ13127 1097 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 HABP2Q14520 560 aaPredicted RBP6.41□□□□□ -1.38
SKP1-208ENST00000521216 APOA5Q6Q788 366 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 SYNE4Q8N205 404 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 TMEM132CQ8N3T6 1108 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 CPEB3Q8NE35 698 aaKnown RBP6.41□□□□□ -1.38
SKP1-208ENST00000521216 IL31RAQ8NI17 732 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 MRGPRX1Q96LB2 322 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 SMOQ99835 787 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 VKORC1Q9BQB6 163 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 APOL5Q9BWW9 433 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 C22orf23Q9BZE7 217 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms