RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CD248Q9HCU0 757 aa7.16□□□□□ -1.26
PABPC1-216ENST00000520868 INTS7Q9NVH2 962 aaKnown RBP7.16□□□□□ -1.26
PABPC1-216ENST00000520868 GNL3LQ9NVN8 582 aaKnown RBP7.16□□□□□ -1.26
PABPC1-216ENST00000520868 NR2E1Q9Y466 385 aa7.16□□□□□ -1.26
PABPC1-216ENST00000520868 PTPRCP08575 1304 aa7.16□□□□□ -1.26
PABPC1-216ENST00000520868 KIF16BQ96L93 1317 aa7.16□□□□□ -1.26
PABPC1-216ENST00000520868 ADGRA2Q96PE1 1338 aa7.16□□□□□ -1.26
PABPC1-216ENST00000520868 ZSWIM8A7E2V4 1837 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 ZNF623O75123 536 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 PHKA1P46020 1223 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 RGS3P49796 1198 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 SELENOPP49908 381 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 KIF11P52732 1056 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 ALDH6A1Q02252 535 aaKnown RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 PABPC4Q13310 644 aaKnown RBP eCLIP7.15□□□□□ -1.261e-323■■■■■ 48.7
PABPC1-216ENST00000520868 PICALMQ13492 652 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 NFYCQ13952 458 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 ZNF460Q14592 562 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 ZNF174Q15697 407 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 FASTKD5Q7L8L6 764 aaKnown RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 SCYL3Q8IZE3 742 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 U2AF1L4Q8WU68 220 aaKnown RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 ERCC4Q92889 916 aaPredicted RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 HTATIP2Q9BUP3 242 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 KLC2Q9H0B6 622 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 PIF1Q9H611 641 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 ABCF2Q9UG63 623 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 CDC42EP3Q9UKI2 254 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 DENND2AQ9ULE3 1009 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 PA2G4Q9UQ80 394 aaKnown RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 TSC22D4Q9Y3Q8 395 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 NR2E3Q9Y5X4 410 aa7.15□□□□□ -1.26
PABPC1-216ENST00000520868 LRRFIP2Q9Y608 721 aaKnown RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 RPAP1Q9BWH6 1393 aaPredicted RBP7.15□□□□□ -1.26
PABPC1-216ENST00000520868 LAMB1P07942 1786 aa7.15□□□□□ -1.27
PABPC1-216ENST00000520868 RBBP6Q7Z6E9 1792 aaKnown RBP7.15□□□□□ -1.27
PABPC1-216ENST00000520868 RANBP2P49792 3224 aaKnown RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 PTPDC1A2A3K4 754 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 DDTLA6NHG4 134 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 TNPO2O14787 897 aaKnown RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 ARHGAP6O43182 974 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 SGPL1O95470 568 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 TFRCP02786 760 aaKnown RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 CYP17A1P05093 508 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 JMJD7P0C870 316 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 ADORA1P30542 326 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 FLT3LGP49771 235 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 CDSNQ15517 529 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 AGBL4Q5VU57 503 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 TRIM68Q6AZZ1 485 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 UBE2Q1Q7Z7E8 422 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 RTN4RL1Q86UN2 441 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 TAX1BP1Q86VP1 789 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 ARAP2Q8WZ64 1704 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 APPBP2Q92624 585 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 RNPC3Q96LT9 517 aaKnown RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 WWC2-AS2Q96NR7 200 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 GNRHR2Q96P88 292 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 IDI2Q9BXS1 227 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-216ENST00000520868 B4GALT6Q9UBX8 382 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 OAZ3Q9UMX2 235 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 AFG3L2Q9Y4W6 797 aa7.14□□□□□ -1.27
PABPC1-216ENST00000520868 ZNF521Q96K83 1311 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 SALL1Q9NSC2 1324 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 TRIM75PA6NK02 468 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 CBX4O00257 560 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 MATN3O15232 486 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 ENTPD3O75355 529 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 UBTFL1P0CB47 393 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 TNFRSF1AP19438 455 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 CR2P20023 1033 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 SDSP20132 328 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 IL15P40933 162 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 BTDP43251 543 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 TIMM10P62072 90 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 ROM1Q03395 351 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 PCOLCEQ15113 449 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 CDCA2Q69YH5 1023 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 TCTN3Q6NUS6 607 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 ZNF585AQ6P3V2 769 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 C16orf86Q6ZW13 317 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 USP30Q70CQ3 517 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 DZIP1Q86YF9 867 aaKnown RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 Q8TCH9 128 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 SMCR8Q8TEV9 937 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 FOXRED1Q96CU9 486 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 DEFB118Q96PH6 123 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 OR10A2Q9H208 303 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 DDX4Q9NQI0 724 aaKnown RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 SMC4Q9NTJ3 1288 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 PUF60Q9UHX1 559 aaKnown RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 ZFR2Q9UPR6 939 aaKnown RBP7.13□□□□□ -1.27
PABPC1-216ENST00000520868 AK9Q5TCS8 1911 aa7.13□□□□□ -1.27
PABPC1-216ENST00000520868 ATRNL1Q5VV63 1379 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 CTNND1O60716 968 aaKnown RBP7.12□□□□□ -1.27
PABPC1-216ENST00000520868 CIAO1O76071 339 aa7.12□□□□□ -1.27
PABPC1-216ENST00000520868 MRE11P49959 708 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms