RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 ASMTLO95671 621 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 CYP1A2P05177 515 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 SERPINB3P29508 390 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 PHBP35232 272 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 LMNB2Q03252 620 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 PDK4Q16654 411 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 FAM71AQ8IYT1 594 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 CPXCR1Q8N123 301 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 TSSK1BQ9BXA7 367 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 KCNQ5Q9NR82 932 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 PSMC3IPQ9P2W1 217 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 ENO1P06733 434 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 SSTR1P30872 391 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCDC15Q0P6D6 951 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 RHPN2Q8IUC4 686 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 EGFL6Q8IUX8 553 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 SEMA4DQ92854 862 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 TTC25Q96NG3 672 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
TRAPPC9-208ENST00000520857 C2orf71A6NGG8 1288 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CNGA1P29973 690 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 HADHBP55084 474 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 YWHAGP61981 247 aaKnown RBP eCLIP13.54□□□□□ -0.244e-6■■■■□ 21.9
TRAPPC9-208ENST00000520857 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 LRRC6Q86X45 466 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 RIBC1Q8N443 379 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CEP120Q8N960 986 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 NSL1Q96IY1 281 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 NOCTQ9UK39 431 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 DNPEPQ9ULA0 475 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 A6NHS1 94 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 E7ENQ6 273 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 H3BRJ5 948 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 BASP1P80723 227 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 NBPF20Q3BBV1 942 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 TNFAIP8L3Q5GJ75 292 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 LRRC74BQ6ZQY2 392 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 RFWD2Q8NHY2 731 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CD101Q93033 1021 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARL8BQ9NVJ2 186 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 DMAC2Q9NW81 257 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 SENP1Q9P0U3 644 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCDC195A0A1B0GUA6 201 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 B2RBV5 119 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 FESP07332 822 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 ADRB2P07550 413 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CENPCQ03188 943 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 CUL3Q13618 768 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 HIF1AQ16665 826 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 PPP1R15BQ5SWA1 713 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 ARMC3Q5W041 872 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 ANKLE1Q8NAG6 615 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 TCP10LQ8TDR4 215 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 RSAD2Q8WXG1 361 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 SLC7A6OSQ96CW6 309 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 WRAP73Q9P2S5 460 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 PI4KBQ9UBF8 816 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
TRAPPC9-208ENST00000520857 I3L4J1 428 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 PIK3CDO00329 1044 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 LPXNO60711 386 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 YY1P25490 414 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 STAT2P52630 851 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCNG2Q16589 344 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 IRGCQ6NXR0 463 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 RHBDF2Q6PJF5 856 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 TMEM270Q6UE05 265 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 C4orf50Q6ZRC1 276 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 C3orf62Q6ZUJ4 267 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 C12orf50Q8NA57 414 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 PSPC1Q8WXF1 523 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 FAM213AQ9BRX8 229 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 LGALS13Q9UHV8 139 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 GAKO14976 1311 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 IGKV6D-41A0A0C4DH26 115 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 GNAZP19086 355 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 IRX4P78413 519 aa13.53□□□□□ -0.24
TRAPPC9-208ENST00000520857 LAMB3Q13751 1172 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms