RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 SPIRE2Q8WWL2 714 aa16.41■□□□□ 0.22
MTCL1-209ENST00000520495 MRRFQ96E11 262 aaKnown RBP16.41■□□□□ 0.22
MTCL1-209ENST00000520495 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
MTCL1-209ENST00000520495 DCLK3Q9C098 648 aa16.41■□□□□ 0.22
MTCL1-209ENST00000520495 ZBED4O75132 1171 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 LDHBP07195 334 aaKnown RBP16.4■□□□□ 0.22
MTCL1-209ENST00000520495 TRIM49P0CI25 452 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 TRIM49CP0CI26 452 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 HPCAP84074 193 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 CYTH2Q99418 400 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 MAK16Q9BXY0 300 aaKnown RBP16.4■□□□□ 0.22
MTCL1-209ENST00000520495 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 MAGEC1O60732 1142 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 PLS3P13797 630 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 ADRA1DP25100 572 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 CDK16Q00536 496 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 HNRNPDQ14103 355 aaKnown RBP16.4■□□□□ 0.22
MTCL1-209ENST00000520495 BBOF1Q8ND07 529 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 DNAJC1Q96KC8 554 aaKnown RBP16.4■□□□□ 0.22
MTCL1-209ENST00000520495 SAYSD1Q9NPB0 183 aa16.4■□□□□ 0.22
MTCL1-209ENST00000520495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 A0A0J9YVX5 310 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 PICALMQ13492 652 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 P3H1Q32P28 736 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 RIPOR1Q6ZS17 1223 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 ZNF804AQ7Z570 1209 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 NET1Q7Z628 596 aaPredicted RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 FBXO33Q7Z6M2 555 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 CATSPER3Q86XQ3 398 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 CCDC110Q8TBZ0 833 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 SLC5A5Q92911 643 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 DNM3Q9UQ16 869 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 MTO1Q9Y2Z2 717 aaKnown RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 B2RBV5 119 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 USP1O94782 785 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 KRT4P19013 534 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 CPA2P48052 419 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 TMEM259Q4ZIN3 620 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 CLEC4GQ6UXB4 293 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 TTC7BQ86TV6 843 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 HERPUD2Q9BSE4 406 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 TMEM120AQ9BXJ8 343 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 PHACTR1Q9C0D0 580 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 KCNK13Q9HB14 408 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 UBE2TQ9NPD8 197 aaPredicted RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 DNAJB4Q9UDY4 337 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 R3HDM2Q9Y2K5 976 aaKnown RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 NEU2Q9Y3R4 380 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 FRMPD2Q68DX3 1309 aaPredicted RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 BCRP11274 1271 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 MYL7Q01449 175 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 RASSF3Q86WH2 238 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 LRRC6Q86X45 466 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 DGCR14Q96DF8 476 aaKnown RBP16.39■□□□□ 0.21
MTCL1-209ENST00000520495 CLMNQ96JQ2 1002 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 PANX3Q96QZ0 392 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 NDUFA13Q9P0J0 144 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 PPM1HQ9ULR3 514 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
MTCL1-209ENST00000520495 RGS2P41220 211 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 MED21Q13503 144 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 SEPT7Q16181 437 aaKnown RBP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 ZCCHC9Q8N567 271 aaKnown RBP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 CATSPER2Q96P56 530 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 EYA3Q99504 573 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 ARHGEF4Q9NR80 690 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 PTTG2Q9NZH5 202 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 BUD23O43709 281 aaKnown RBP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 ZNF862O60290 1169 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 CIB2O75838 187 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 PIM1P11309 404 aaPredicted RBP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 ACTR3P61158 418 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 GRM2Q14416 872 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 TRMT5Q32P41 509 aaKnown RBP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 HP1BP3Q5SSJ5 553 aaPredicted RBP16.38■□□□□ 0.21
MTCL1-209ENST00000520495 C6orf163Q5TEZ5 329 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 KLC3Q6P597 504 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 RAPH1Q70E73 1250 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 ANKS1BQ7Z6G8 1248 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 SCUBE1Q8IWY4 988 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 CCDC89Q8N998 374 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 HAUS1Q96CS2 278 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 MANSC1Q9H8J5 431 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 ARMCX1Q9P291 453 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
MTCL1-209ENST00000520495 SLC26A4O43511 780 aa16.37■□□□□ 0.21
MTCL1-209ENST00000520495 SLURP2P0DP57 97 aa16.37■□□□□ 0.21
MTCL1-209ENST00000520495 ITGA9Q13797 1035 aa16.37■□□□□ 0.21
MTCL1-209ENST00000520495 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
MTCL1-209ENST00000520495 CAPN12Q6ZSI9 719 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms