RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 SNX9Q9Y5X1 595 aa18.84■□□□□ 0.61
IGHV3-52-201ENST00000519770 PDCD11Q14690 1871 aaKnown RBP18.84■□□□□ 0.61
IGHV3-52-201ENST00000519770 BRCA2P51587 3418 aa18.83■□□□□ 0.61
IGHV3-52-201ENST00000519770 TDRD15B5MCY1 1934 aaKnown RBP18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 KPNA7A9QM74 516 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 TRAPPC3O43617 180 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 HUS1O60921 280 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 MFAP3LO75121 409 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 NOL4O94818 638 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 ALDH7A1P49419 539 aaKnown RBP18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 DRAP1Q14919 205 aaPredicted RBP18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 UPP1Q16831 310 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 SMYD5Q6GMV2 418 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 GJB7Q6PEY0 223 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 ARHGEF19Q8IW93 802 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 CMTR2Q8IYT2 770 aaKnown RBP18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 CRIPAKQ8N1N5 446 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 XYLT2Q9H1B5 865 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 FAM124BQ9H5Z6 455 aaPredicted RBP18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 AAASQ9NRG9 546 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 FAN1Q9Y2M0 1017 aa18.83■□□□□ 0.6
IGHV3-52-201ENST00000519770 LTBP2Q14767 1821 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 EPHB6O15197 1021 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 TADA2AO75478 443 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 KRT5P13647 590 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 ATP2A2P16615 1042 aaKnown RBP18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 GATMP50440 423 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 FXR1P51114 621 aaKnown RBP eCLIP18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 EPHB4P54760 987 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 ADKP55263 362 aaKnown RBP18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 LILRA4P59901 499 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 APBA1Q02410 837 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 DSC1Q08554 894 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 NAB2Q15742 525 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 ASIC2Q16515 512 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 PDXDC1Q6P996 788 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 SCARA5Q6ZMJ2 495 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 METTL23Q86XA0 190 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 COLGALT2Q8IYK4 626 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 APPL2Q8NEU8 664 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 CXorf38Q8TB03 319 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 TTYH3Q9C0H2 523 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 APOBEC3GQ9HC16 384 aaKnown RBP18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 INSL6Q9Y581 213 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 PCDHB4Q9Y5E5 795 aa18.82■□□□□ 0.6
IGHV3-52-201ENST00000519770 LRRN2O75325 713 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 DDHD2O94830 711 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 FERP16591 822 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 MAGEA10P43363 369 aaPredicted RBP18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 BPIFB4P59827 614 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 ZNF280BQ86YH2 543 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 SYN2Q92777 582 aaPredicted RBP18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 RNPC3Q96LT9 517 aaKnown RBP18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 PANX2Q96RD6 677 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 NAA15Q9BXJ9 866 aaKnown RBP18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 NRDE2Q9H7Z3 1164 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 DSEQ9UL01 958 aa18.81■□□□□ 0.6
IGHV3-52-201ENST00000519770 LRRC53A6NM62 1247 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 F8VZ95 297 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 CYB561D2O14569 222 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 GJB5O95377 273 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 ODC1P11926 461 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 LAG3P18627 525 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 SOX5P35711 763 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 ELAVL2Q12926 359 aaKnown RBP18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 DPH6Q7L8W6 267 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 HERC6Q8IVU3 1022 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 UBE2OQ9C0C9 1292 aaKnown RBP18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 SNX25Q9H3E2 840 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 ABHD10Q9NUJ1 306 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 POLIQ9UNA4 740 aa18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 PRG3Q9Y2Y8 225 aaPredicted RBP18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 BZW2Q9Y6E2 419 aaKnown RBP18.8■□□□□ 0.6
IGHV3-52-201ENST00000519770 TMEM189-UBE2V1I3L0A0 370 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 NRP1O14786 923 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 PPEF2O14830 753 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 TLL1O43897 1013 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 WEE2P0C1S8 567 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 FAM163BP0C2L3 166 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 CD58P19256 250 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 ARID5AQ03989 594 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 DPY19L2P1Q6NXN4 242 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 FIBCD1Q8N539 461 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 SHC3Q92529 594 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 BAP1Q92560 729 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 ELMO3Q96BJ8 720 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 ZNF689Q96CS4 500 aaPredicted RBP18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 SENP8Q96LD8 212 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 KREMEN1Q96MU8 473 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 ZNF558Q96NG5 402 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 RAD9AQ99638 391 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 BCO2Q9BYV7 579 aa18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 CXXC1Q9P0U4 656 aaPredicted RBP18.79■□□□□ 0.6
IGHV3-52-201ENST00000519770 GFPT2O94808 682 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 ASPAP45381 313 aa18.78■□□□□ 0.6
IGHV3-52-201ENST00000519770 BCAR1P56945 870 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms