RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 SOX5P35711 763 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 ZNF131P52739 623 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 KRT76Q01546 638 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 MGAT3Q09327 533 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 MARCH8Q5T0T0 291 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 LNX1Q8TBB1 728 aaPredicted RBP11.74□□□□□ -0.53
SPIDR-206ENST00000518074 KAT5Q92993 513 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 RABEP2Q9H5N1 569 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 SEL1LQ9UBV2 794 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 SUN2Q9UH99 717 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 RANBP2P49792 3224 aaKnown RBP11.74□□□□□ -0.53
SPIDR-206ENST00000518074 AMHP03971 560 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 FERP16591 822 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 ZNF484Q5JVG2 852 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 PPP2R2DQ66LE6 453 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 GOLGA6L1Q8N7Z2 621 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 SLC20A1Q8WUM9 679 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 RAD9AQ99638 391 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 RMI1Q9H9A7 625 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 TET1Q8NFU7 2136 aa11.74□□□□□ -0.53
SPIDR-206ENST00000518074 HBP1O60381 514 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 VAMP7P51809 220 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 RABGGTBP53611 331 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 JAM2P57087 298 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 B3GNT9Q6UX72 402 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 RDM1Q8NG50 284 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 ACCSQ96QU6 501 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 HSPBP1Q9NZL4 362 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 GABBR1Q9UBS5 961 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 SMIM35A0A1B0GVV1 85 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 SYF2O95926 243 aaKnown RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 FAM153BP0C7A2 387 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 FAM200BP0CF97 657 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 PLS3P13797 630 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.532e-7■□□□□ 8.5
SPIDR-206ENST00000518074 LLGL1Q15334 1064 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 FAM153CQ494X1 144 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 ARHGEF19Q8IW93 802 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 CEP170P1Q96L14 293 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 STK33Q9BYT3 514 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 DMAC2Q9NW81 257 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 LMCD1Q9NZU5 365 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 FAM153AQ9UHL3 310 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 GJB5O95377 273 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 INSRRP14616 1297 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 HNRNPH2P55795 449 aaKnown RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 HTRA4P83105 476 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 TCTN1Q2MV58 587 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 TTC19Q6DKK2 380 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 SWSAP1Q6NVH7 229 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 CBWD2Q8IUF1 395 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 PPM1KQ8N3J5 372 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 TSEN2Q8NCE0 465 aaKnown RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 SLC35G2Q8TBE7 412 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
SPIDR-206ENST00000518074 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 MAFBQ9Y5Q3 323 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-206ENST00000518074 IGSF9BQ9UPX0 1349 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 ANKRD63C9JTQ0 380 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 TLL1O43897 1013 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 CALCAP01258 141 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 CHRNA1P02708 482 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 PSAPP07602 524 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 DLATP10515 647 aaKnown RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 TAP1Q03518 808 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 IER5Q5VY09 327 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 DDX42Q86XP3 938 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 XXYLT1Q8NBI6 393 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 DBF4BQ8NFT6 615 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 SNRNP27Q8WVK2 155 aaKnown RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 CTNNBL1Q8WYA6 563 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 SAMD11Q96NU1 681 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 DDX47Q9H0S4 455 aaKnown RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 THAP2Q9H0W7 228 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 ZNF302Q9NR11 478 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 TOPORSQ9NS56 1045 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 INSL6Q9Y581 213 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 WDR64B1ANS9 1081 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 RAD51CO43502 376 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 ITGA4P13612 1032 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 SFNP31947 248 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 PRKCIP41743 596 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 PSMC5P62195 406 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 MRPS6P82932 125 aaKnown RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 ZNF211Q13398 564 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-206ENST00000518074 GOLGA5Q8TBA6 731 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
SPIDR-206ENST00000518074 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms