RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SNX27Q96L92 541 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 Q96M66 194 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CCDC43Q96MW1 224 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 NOX5Q96PH1 765 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 FNBP1Q96RU3 617 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 PIGSQ96S52 555 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 REEP2Q9BRK0 252 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 DDX23Q9BUQ8 820 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CDADC1Q9BWV3 514 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 HDAC8Q9BY41 377 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADAM7Q9H2U9 754 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 SEMA6BQ9H3T3 888 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 RNPEPQ9H4A4 650 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CYP4F11Q9HBI6 524 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 NOD2Q9HC29 1040 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 EPB41L4AQ9HCS5 686 aaPredicted RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC6A20Q9NP91 592 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 RBM12Q9NTZ6 932 aaKnown RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM105AQ9NUU6 356 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 MARCH2Q9P0N8 246 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF212Q9UDV6 495 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 CAMK2AQ9UQM7 478 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 USP15Q9Y4E8 981 aaPredicted RBP4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 HS3ST4Q9Y661 456 aa4.36□□□□□ -1.71
RNU4-60P-201ENST00000517239 ELOA3CA0A087WX78 387 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRAMEF22A3QJZ6 481 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ELOA3DA6NLF2 546 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 C22orf46C9J442 243 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 F8W031 263 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC27A2O14975 620 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 VILLO15195 856 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 IPO8O15397 1037 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 DNPH1O43598 174 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 FKTNO75072 461 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF205O95201 554 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLU7O95391 586 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 AHSGP02765 367 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 NR2F1P10589 423 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ALAS1P13196 640 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 KRT10P13645 584 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PTPN1P18031 435 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 HDCP19113 662 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MALP21145 153 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 FGFR4P22455 802 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 HADHAP40939 763 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PAFAH1B1P43034 410 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCNJ5P48544 419 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF132P52740 706 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 BCAT1P54687 386 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 POLR2FP61218 127 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBXN2AP68543 259 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC6A3Q01959 620 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MGAT2Q10469 447 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SCAPQ12770 1279 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC13A2Q13183 592 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MPP3Q13368 585 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADAM15Q13444 863 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PPP2R5BQ15173 497 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 GPR68Q15743 365 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 AOC3Q16853 763 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ELOA3BQ3SY89 546 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 FLYWCH1Q4VC44 716 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PARP10Q53GL7 1025 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SETMARQ53H47 684 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 BMP2KLQ5H9B9 411 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 CC2D1BQ5T0F9 858 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ARMC4Q5T2S8 1044 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM69AQ5T7M9 428 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ATPAF1Q5TC12 328 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRAMEF18Q5VWM3 479 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ARL6IP4Q66PJ3 421 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MCTP2Q6DN12 878 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCTD1Q719H9 257 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SZRD1Q7Z422 152 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 PXKQ7Z7A4 578 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLFN11Q7Z7L1 901 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ANKRD13BQ86YJ7 626 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 CILP2Q8IUL8 1156 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC44A2Q8IWA5 706 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 DMRTC2Q8IXT2 367 aaPredicted RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 LZTR1Q8N653 840 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 NAT16Q8N8M0 369 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 NLGN2Q8NFZ4 835 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ELOA3Q8NG57 546 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 UHMK1Q8TAS1 419 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 KBTBD7Q8WVZ9 684 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 GAB3Q8WWW8 586 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 ASB15Q8WXK1 588 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 MAML1Q92585 1016 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 TAF4BQ92750 862 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 STAMQ92783 540 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SDCCAG3Q96C92 435 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM120BQ96EK7 910 aaKnown RBP4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 SAMD11Q96NU1 681 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 RTKNQ9BST9 563 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIM54Q9BYV2 358 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 OSBPL6Q9BZF3 934 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 EDEM3Q9BZQ6 932 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 USP44Q9H0E7 712 aa4.35□□□□□ -1.71
RNU4-60P-201ENST00000517239 CHST8Q9H2A9 424 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms