RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 LRRC52Q8N7C0 313 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 CNOT6LQ96LI5 555 aaKnown RBP16.25■□□□□ 0.19
PDCD6-211ENST00000515587 MED15Q96RN5 788 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 BPIFA3Q9BQP9 254 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
PDCD6-211ENST00000515587 MMRN2Q9H8L6 949 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 ENTPD7Q9NQZ7 604 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 TLR9Q9NR96 1032 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 NFE2L3Q9Y4A8 694 aa16.25■□□□□ 0.19
PDCD6-211ENST00000515587 REV3LO60673 3130 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 SMTNL1A8MU46 457 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 SOD2P04179 222 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 URODP06132 367 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 CA8P35219 290 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 MTIF2P46199 727 aaKnown RBP16.24■□□□□ 0.19
PDCD6-211ENST00000515587 GCLMP48507 274 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 MARSP56192 900 aaKnown RBP16.24■□□□□ 0.19
PDCD6-211ENST00000515587 USP41Q3LFD5 358 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 C3orf58Q8NDZ4 430 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 MICAL1Q8TDZ2 1067 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 ZNF516Q92618 1163 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 FAM84AQ96KN4 292 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 FUCA2Q9BTY2 467 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 HERC2P3Q9BVR0 1158 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 TMEM8AQ9HCN3 771 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 CD320Q9NPF0 282 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 SSX2IPQ9Y2D8 614 aa16.24■□□□□ 0.19
PDCD6-211ENST00000515587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDCD6-211ENST00000515587 PRRC2BQ5JSZ5 2229 aaKnown RBP16.24■□□□□ 0.19
PDCD6-211ENST00000515587 PPEF2O14830 753 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 CSPG5O95196 566 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 GLUD2P49448 558 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 ZNF165P49910 485 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 MXI1P50539 228 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 LILRA4P59901 499 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 MCCD1P59942 119 aaPredicted RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 CETN1Q12798 172 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 SMC1AQ14683 1233 aaKnown RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 ZACNQ401N2 412 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 C1orf220Q5T0J3 134 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 FAM171A1Q5VUB5 890 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 TDRD10Q5VZ19 366 aaKnown RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 KRT39Q6A163 491 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 PDXDC1Q6P996 788 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 SV2AQ7L0J3 742 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 CEP57Q86XR8 500 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 AOPEPQ8N6M6 819 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 CCDC150Q8NCX0 1101 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 ANKRD20A12PQ8NF67 263 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 PPP2R3CQ969Q6 453 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 MRPL38Q96DV4 380 aaKnown RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 HPDLQ96IR7 371 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 SUSD3Q96L08 255 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 GPR62Q9BZJ7 368 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 NGRNQ9NPE2 291 aaKnown RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 MRPL17Q9NRX2 175 aaKnown RBP16.23■□□□□ 0.19
PDCD6-211ENST00000515587 SIX4Q9UIU6 781 aa16.23■□□□□ 0.19
PDCD6-211ENST00000515587 BECN2A8MW95 431 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 KPNA7A9QM74 516 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 PI4K2BG5E9Z4 385 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 I3L4J1 428 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 C4BPAP04003 597 aaKnown RBP16.22■□□□□ 0.19
PDCD6-211ENST00000515587 TPM2P07951 284 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 ODC1P11926 461 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 DNAJB1P25685 340 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 EEF1GP26641 437 aaKnown RBP16.22■□□□□ 0.19
PDCD6-211ENST00000515587 ATICP31939 592 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 BRCC3P46736 316 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 TPM4P67936 248 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 CREMQ03060 361 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 PPP3CAQ08209 521 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 NCOA4Q13772 614 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 PLPP4Q5VZY2 271 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 TRIM59Q8IWR1 403 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 TMEM130Q8N3G9 435 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 APPL2Q8NEU8 664 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 SLC35C1Q96A29 364 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 TTPALQ9BTX7 342 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 IMPG2Q9BZV3 1241 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 ZBP1Q9H171 429 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 PCDHB8Q9UN66 801 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 MTCH2Q9Y6C9 303 aa16.22■□□□□ 0.19
PDCD6-211ENST00000515587 VWA8A3KMH1 1905 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 ATG2AQ2TAZ0 1938 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 KCNJ18B7U540 433 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 SYN3O14994 580 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 CXCL14O95715 111 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 EFEMP2O95967 443 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 AFPP02771 609 aaKnown RBP16.21■□□□□ 0.19
PDCD6-211ENST00000515587 CTSAP10619 480 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.19
PDCD6-211ENST00000515587 ERVFC1P60507 584 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 MYL7Q01449 175 aa16.21■□□□□ 0.19
PDCD6-211ENST00000515587 NHLH1Q02575 133 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms