RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CHADO15335 359 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 HIP1RO75146 1068 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
LMNA-223ENST00000515459 CNR2P34972 360 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 PTGDRQ13258 359 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 GAS6Q14393 721 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 PDIA5Q14554 519 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 PPM1JQ5JR12 505 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 DAW1Q8N136 415 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 SHKBP1Q8TBC3 707 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 C8orf76Q96K31 380 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 C8orf33Q9H7E9 229 aaPredicted RBP17.2■□□□□ 0.34
LMNA-223ENST00000515459 C17orf75Q9HAS0 396 aa17.2■□□□□ 0.34
LMNA-223ENST00000515459 CHURC1-FNTBB4DL54 471 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 E9PMD0 336 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 MEFVO15553 781 aaPredicted RBP17.19■□□□□ 0.34
LMNA-223ENST00000515459 FNTBP49356 437 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 NEK4P51957 841 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 KPNA1P52294 538 aaPredicted RBP17.19■□□□□ 0.34
LMNA-223ENST00000515459 YWHAHQ04917 246 aaPredicted RBP17.19■□□□□ 0.34
LMNA-223ENST00000515459 FCHO2Q0JRZ9 810 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 PLD1Q13393 1074 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 CSRP2Q16527 193 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 SLC10A6Q3KNW5 377 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 PRR23CQ6ZRP0 262 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
LMNA-223ENST00000515459 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 OXCT2Q9BYC2 517 aaPredicted RBP17.19■□□□□ 0.34
LMNA-223ENST00000515459 RAB34Q9BZG1 259 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 DNM3Q9UQ16 869 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 YIPF1Q9Y548 306 aa17.19■□□□□ 0.34
LMNA-223ENST00000515459 A0A1W2PRU2 124 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 SLC38A8A6NNN8 435 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 M0QZQ0 153 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 HRO43593 1189 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 FOXD2O60548 495 aaPredicted RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 TOM1L1O75674 476 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 OAZ2O95190 189 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 PAPSS2O95340 614 aaPredicted RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 TRAPPC10P48553 1259 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 DMWDQ09019 674 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 ST3GAL1Q11201 340 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 STRN3Q13033 797 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 GNL2Q13823 731 aaKnown RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
LMNA-223ENST00000515459 DGKKQ5KSL6 1271 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 IGSF22Q8N9C0 903 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 RSPRY1Q96DX4 576 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 ZBTB45Q96K62 511 aaPredicted RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 RUSC1Q9BVN2 902 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 LRRC3Q9BY71 257 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 RBM12Q9NTZ6 932 aaKnown RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 ANKFY1Q9P2R3 1169 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 TUBGCP4Q9UGJ1 667 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 NOL7Q9UMY1 257 aaKnown RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 MYH11P35749 1972 aa17.18■□□□□ 0.34
LMNA-223ENST00000515459 NUP210Q8TEM1 1887 aaPredicted RBP17.18■□□□□ 0.34
LMNA-223ENST00000515459 K7ESF4 209 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 SLC16A4O15374 487 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 VNN2O95498 520 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 SOX9P48436 509 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 EPHB3P54753 998 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 MAPK7Q13164 816 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 SRSF5Q13243 272 aaKnown RBP17.17■□□□□ 0.34
LMNA-223ENST00000515459 ST3GAL2Q16842 350 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 SEZ6Q53EL9 994 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 RINT1Q6NUQ1 792 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 USP37Q86T82 979 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 RALGPS2Q86X27 583 aaPredicted RBP17.17■□□□□ 0.34
LMNA-223ENST00000515459 TMC8Q8IU68 726 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 FAM200AQ8TCP9 573 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 PGLYRP2Q96PD5 576 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 NTPCRQ9BSD7 190 aaKnown RBP17.17■□□□□ 0.34
LMNA-223ENST00000515459 KCNG1Q9UIX4 513 aa17.17■□□□□ 0.34
LMNA-223ENST00000515459 TIMM13Q9Y5L4 95 aaPredicted RBP17.17■□□□□ 0.34
LMNA-223ENST00000515459 MYBPHLA2RUH7 354 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 SFI1A8K8P3 1242 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 SPECC1L-ADORA2AF8WAN1 911 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 OR4Q2P0C623 313 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 LRPAP1P30533 357 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 ALDH1A3P47895 512 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 DUSP4Q13115 394 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 NBR1Q14596 966 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 ARHGAP29Q52LW3 1261 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 KRT79Q5XKE5 535 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 HEATR6Q6AI08 1181 aaKnown RBP17.16■□□□□ 0.34
LMNA-223ENST00000515459 Q6ZS52 159 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 C1orf186Q6ZWK4 172 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
LMNA-223ENST00000515459 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 TIPINQ9BVW5 301 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 DNAJC25Q9H1X3 360 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 PLEKHA5Q9HAU0 1116 aa17.16■□□□□ 0.34
LMNA-223ENST00000515459 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.16■□□□□ 0.34
LMNA-223ENST00000515459 OR6C75A6NL08 312 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 DPYSL4O14531 572 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 CLDN3O15551 220 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms