RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PRKD2Q9BZL6 878 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 GOLPH3LQ9H4A5 285 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 WDR6Q9NNW5 1121 aaKnown RBP13.83□□□□□ -0.2
CLCN3-210ENST00000515420 SLC39A2Q9NP94 309 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 AGPAT3Q9NRZ7 376 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 DPP3Q9NY33 737 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 HSPBP1Q9NZL4 362 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ZNF233A6NK53 670 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ADAM12O43184 909 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 RFPL2O75678 378 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ABLIM3O94929 683 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 KIF20AO95235 890 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 RPN1P04843 607 aaKnown RBP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 CYP11A1P05108 521 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 SPATA31D3P0C874 917 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ODC1P11926 461 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ATF2P15336 505 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 TAF6P49848 677 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ROR1Q01973 937 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 RSPO2Q6UXX9 243 aaPredicted RBP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 SPATA31D4Q6ZUB0 917 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ZDHHC14Q8IZN3 488 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 TDRD5Q8NAT2 981 aaKnown RBP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ZSWIM2Q8NEG5 633 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ZNF560Q96MR9 790 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 PCIF1Q9H4Z3 704 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 CDH22Q9UJ99 828 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 ITGA11Q9UKX5 1188 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 DSEQ9UL01 958 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 CLUHO75153 1309 aa13.82□□□□□ -0.2
CLCN3-210ENST00000515420 DOCK8Q8NF50 2099 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 OR6C75A6NL08 312 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 PPEF2O14830 753 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 XYLBO75191 536 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 C8AP07357 584 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 WEE2P0C1S8 567 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 DPYDQ12882 1025 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 STK4Q13043 487 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 KCNB1Q14721 858 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
CLCN3-210ENST00000515420 SV2CQ496J9 727 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 PPM1LQ5SGD2 360 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 USP37Q86T82 979 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 TCEAL8Q8IYN2 117 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 LRRC52Q8N7C0 313 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 XXYLT1Q8NBI6 393 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 KIAA0895Q8NCT3 520 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 ACSF2Q96CM8 615 aaPredicted RBP13.81□□□□□ -0.2
CLCN3-210ENST00000515420 SENP8Q96LD8 212 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 PDE11AQ9HCR9 933 aa13.81□□□□□ -0.2
CLCN3-210ENST00000515420 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 PDXKO00764 312 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 GPR37L1O60883 481 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
CLCN3-210ENST00000515420 TMEM191BP0C7N4 346 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 WNT7BP56706 349 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 TFAMQ00059 246 aaKnown RBP13.8□□□□□ -0.2
CLCN3-210ENST00000515420 MYBPC2Q14324 1141 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 WDR49Q8IV35 697 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 FMR1NBQ8N0W7 255 aaPredicted RBP13.8□□□□□ -0.2
CLCN3-210ENST00000515420 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 C1orf127Q8N9H9 656 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 ANKRD36BP1Q96IX9 119 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 EPHX3Q9H6B9 360 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 PIDD1Q9HB75 910 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 INTS13Q9NVM9 706 aa13.8□□□□□ -0.2
CLCN3-210ENST00000515420 AFF4Q9UHB7 1163 aaKnown RBP13.8□□□□□ -0.2
CLCN3-210ENST00000515420 MYO10Q9HD67 2058 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 KPNA7A9QM74 516 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 SPTLC1O15269 473 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 ELF1P32519 619 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 PSMD6Q15008 389 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
CLCN3-210ENST00000515420 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
CLCN3-210ENST00000515420 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms