RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 NIF3L1Q9GZT8 377 aa10.92□□□□□ -0.66
SNF8-214ENST00000515174 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
SNF8-214ENST00000515174 PDCL3Q9H2J4 239 aa10.92□□□□□ -0.66
SNF8-214ENST00000515174 CYP3A43Q9HB55 503 aa10.92□□□□□ -0.66
SNF8-214ENST00000515174 PAK6Q9NQU5 681 aaPredicted RBP10.92□□□□□ -0.66
SNF8-214ENST00000515174 TAS2R14Q9NYV8 317 aa10.92□□□□□ -0.66
SNF8-214ENST00000515174 PUF60Q9UHX1 559 aaKnown RBP10.92□□□□□ -0.66
SNF8-214ENST00000515174 AMFRQ9UKV5 643 aa10.92□□□□□ -0.66
SNF8-214ENST00000515174 MROH7Q68CQ1 1323 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 MIF4GDA9UHW6 222 aaKnown RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 SEPT4O43236 478 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 BUB1BO60566 1050 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 SRGAP2O75044 1071 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 KRT5P13647 590 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 CDH5P33151 784 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 MAGEA10P43363 369 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 CRYBB1P53674 252 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 MYL6P60660 151 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 BEX3Q00994 111 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 CENPCQ03188 943 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 ZBTB6Q15916 424 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 TMEM132AQ24JP5 1023 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 SEZ6Q53EL9 994 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 TEX35Q5T0J7 233 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 MAP3K21Q5TCX8 1036 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 NOTUMQ6P988 496 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 SLC27A1Q6PCB7 646 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 PHF13Q86YI8 300 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 TDHQ8IZJ6 230 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 SPATA4Q8NEY3 305 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 COG1Q8WTW3 980 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 ZBTB10Q96DT7 871 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 PARD6BQ9BYG5 372 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 BCO2Q9BYV7 579 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 MTMR12Q9C0I1 747 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 THAP2Q9H0W7 228 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 ANKZF1Q9H8Y5 726 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 SPC25Q9HBM1 224 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 MTMR10Q9NXD2 777 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNF8-214ENST00000515174 LCMT1Q9UIC8 334 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 TMEM59LQ9UK28 342 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 PCDHGC3Q9UN70 934 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 PCDHB4Q9Y5E5 795 aa10.91□□□□□ -0.66
SNF8-214ENST00000515174 V9GYY5 206 aaPredicted RBP10.91□□□□□ -0.66
SNF8-214ENST00000515174 C17orf102A2RUQ5 167 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 ZNF185O15231 689 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 MEFVO15553 781 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 LSM8O95777 96 aaKnown RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 PAEPP09466 180 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 CXCL8P10145 99 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 CST5P28325 142 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 TFAMQ00059 246 aaKnown RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 PPP2R5EQ16537 467 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 LRIT3Q3SXY7 679 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 XKR4Q5GH76 650 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 CCDC70Q6NSX1 233 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 FBXO38Q6PIJ6 1188 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 ALKAL1Q6UXT8 129 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 DAAM2Q86T65 1068 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 MCOLN2Q8IZK6 566 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 CEP120Q8N960 986 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 ANKLE1Q8NAG6 615 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 PPP1R13LQ8WUF5 828 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 ZNF606Q8WXB4 792 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 ARHGEF26Q96DR7 871 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 WNT8AQ9H1J5 351 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 CARD9Q9H257 536 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 LHX5Q9H2C1 402 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 HMX1Q9NP08 348 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 SIX4Q9UIU6 781 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 ITGA11Q9UKX5 1188 aa10.9□□□□□ -0.66
SNF8-214ENST00000515174 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.9□□□□□ -0.66
SNF8-214ENST00000515174 ANK1P16157 1881 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 RRP9O43818 475 aaKnown RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 ZRANB2O95218 330 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNF8-214ENST00000515174 FTCDO95954 541 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 PGK1P00558 417 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 MYL3P08590 195 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 FAM163BP0C2L3 166 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 P4HA1P13674 534 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 GNA15P30679 374 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 CLCN6P51797 869 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 RBP5P82980 135 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
SNF8-214ENST00000515174 HIC1Q14526 733 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 KIZQ2M2Z5 673 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 ZNF699Q32M78 642 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 ZNF667Q5HYK9 610 aa10.89□□□□□ -0.67
SNF8-214ENST00000515174 CCDC181Q5TID7 509 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms