RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 USP19O94966 1318 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 TBKBP1A7MCY6 615 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 GRXCR1A8MXD5 290 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 RNASET2O00584 256 aaKnown RBP4.56□□□□□ -1.68
CAST-242ENST00000515063 RAMP2O60895 175 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 ENDOD1O94919 500 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 ABHD16AO95870 558 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 SNRPA1P09661 255 aaKnown RBP4.56□□□□□ -1.68
CAST-242ENST00000515063 LAG3P18627 525 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 PTPN7P35236 360 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 PER3P56645 1201 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 IGBP1P78318 339 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 TIGD2Q4W5G0 525 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 FAM47AQ5JRC9 791 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 RRP12Q5JTH9 1297 aaKnown RBP4.56□□□□□ -1.68
CAST-242ENST00000515063 GDF7Q7Z4P5 450 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 XYLT1Q86Y38 959 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 AMOTL1Q8IY63 956 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 ULK2Q8IYT8 1036 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 OR7D4Q8NG98 312 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 OR10H5Q8NGA6 315 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 MDM1Q8TC05 714 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 TGFBRAP1Q8WUH2 860 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 LARP4BQ92615 738 aaKnown RBP4.56□□□□□ -1.68
CAST-242ENST00000515063 TFAP2CQ92754 450 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 FRAT1Q92837 279 aaPredicted RBP4.56□□□□□ -1.68
CAST-242ENST00000515063 RBM12Q9NTZ6 932 aaKnown RBP4.56□□□□□ -1.68
CAST-242ENST00000515063 DNAJC28Q9NX36 388 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 GPRC5BQ9NZH0 403 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 CACNA1FO60840 1977 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 ARHGAP23Q9P227 1491 aa4.56□□□□□ -1.68
CAST-242ENST00000515063 ADAMTS13Q76LX8 1427 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 RGPD1P0DJD0 1748 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 TTC21AQ8NDW8 1320 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 A0A087X1B8 175 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 FAM171A2A8MVW0 826 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 TEX33O43247 280 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 RHOBTB3O94955 611 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 TRIM27P14373 513 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 IL2RBP14784 551 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 APOBEC3AP31941 199 aaPredicted RBP4.55□□□□□ -1.68
CAST-242ENST00000515063 MALLQ13021 153 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 SP140Q13342 867 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 BMT2Q1RMZ1 405 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 TOR2AQ5JU69 321 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 PRAMEF14Q5SWL7 426 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 MBNL2Q5VZF2 373 aaKnown RBP4.55□□□□□ -1.68
CAST-242ENST00000515063 ARMC6Q6NXE6 501 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 KCNK18Q7Z418 384 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 MRGPREQ86SM8 312 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 DRC7Q8IY82 874 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 ANKRD13AQ8IZ07 590 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 PROKR1Q8TCW9 393 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 TSPEARQ8WU66 669 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 GCC1Q96CN9 775 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 COG3Q96JB2 828 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 CEP89Q96ST8 783 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 API5Q9BZZ5 524 aaKnown RBP4.55□□□□□ -1.68
CAST-242ENST00000515063 REXO4Q9GZR2 422 aaKnown RBP4.55□□□□□ -1.68
CAST-242ENST00000515063 LANCL2Q9NS86 450 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 ZBTB40Q9NUA8 1239 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 TRPM5Q9NZQ8 1165 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.55□□□□□ -1.68
CAST-242ENST00000515063 OVOS2A0A0J9YW53 1432 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 OVOS2Q6IE36 1432 aa4.55□□□□□ -1.68
CAST-242ENST00000515063 METP08581 1390 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 KIAA0232Q92628 1395 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 SOS1Q07889 1333 aaPredicted RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 TTC21BQ7Z4L5 1316 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 ALG1L2C9J202 215 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 K7ESF4 209 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 PRKD3O94806 890 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 ADSLP30566 484 aaPredicted RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 PRKAR2BP31323 418 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 CLRN1P58418 232 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 CCT2P78371 535 aaKnown RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 SRSF2Q01130 221 aaKnown RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 NHLH2Q02577 135 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 TAP1Q03518 808 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 ATXN7L2Q5T6C5 722 aaPredicted RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 RHOUQ7L0Q8 258 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 ZNF572Q7Z3I7 529 aaPredicted RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 NECAB2Q7Z6G3 386 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 LDLRAD3Q86YD5 345 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 LILRA3Q8N6C8 439 aaPredicted RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 MYEOVQ96EZ4 313 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 CYFIP2Q96F07 1278 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 MENTQ9BUN1 341 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 PUS7LQ9H0K6 701 aaKnown RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 PCDH12Q9NPG4 1184 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 CCM2LQ9NUG4 571 aaPredicted RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 TMEM140Q9NV12 185 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 NOB1Q9ULX3 412 aaKnown RBP4.54□□□□□ -1.68
CAST-242ENST00000515063 ATP8A1Q9Y2Q0 1164 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 FMN2Q9NZ56 1722 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 SSH2Q76I76 1423 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 ANKARQ7Z5J8 1434 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 PTPRUQ92729 1446 aa4.54□□□□□ -1.68
CAST-242ENST00000515063 ABCC4O15439 1325 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms