RNA–Protein interactions for RNA: ENST00000514815.1

PAPSS1-208, Transcript of 3'-phosphoadenosine 5'-phosphosulfate synthase 1, human

TSL 5

Gene PAPSS1, Length 296 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPSS1-208	ENST00000514815	SCN1A	P35498	2009 aa		13.72	□□□□□ -0.21
PAPSS1-208	ENST00000514815	COL4A6	Q14031	1691 aa		13.72	□□□□□ -0.21
PAPSS1-208	ENST00000514815	TDRD15	B5MCY1	1934 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	CASTOR2	A6NHX0	329 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	PODXL	O00592	558 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	B4GALT3	O60512	393 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	CLSTN1	O94985	981 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	AMH	P03971	560 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	PNMA6A	P0CW24	399 aa	Predicted RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	P4HA1	P13674	534 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	ACO1	P21399	889 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	TAF6	P49848	677 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	GATM	P50440	423 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	WDR5	P61964	334 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	DEFB103A	P81534	67 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	ASIC2	Q16515	512 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	TSR1	Q2NL82	804 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	WDR72	Q3MJ13	1102 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	WDR59	Q6PJI9	974 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	FAM71A	Q8IYT1	594 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	DDX27	Q96GQ7	796 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	UROC1	Q96N76	676 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	BAG1	Q99933	345 aa	Predicted RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	MRPL9	Q9BYD2	267 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	SMYD3	Q9H7B4	428 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	CYP3A43	Q9HB55	503 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	CACNG4	Q9UBN1	327 aa		13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	NXF1	Q9UBU9	619 aa	Known RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.71	□□□□□ -0.21
PAPSS1-208	ENST00000514815	FOXN3	O00409	490 aa	Predicted RBP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SPTLC1	O15269	473 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	FER	P16591	822 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SYN1	P17600	705 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	PRKCI	P41743	596 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	AARS	P49588	968 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	CLCNKB	P51801	687 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	EPHB4	P54760	987 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TNNC1	P63316	161 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	UPP1	Q16831	310 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SV2C	Q496J9	727 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	HGSNAT	Q68CP4	663 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SCARA5	Q6ZMJ2	495 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	COLGALT2	Q8IYK4	626 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TNS4	Q8IZW8	715 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	LRRC43	Q8N309	656 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	C3orf58	Q8NDZ4	430 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TOP1MT	Q969P6	601 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TRIM44	Q96DX7	344 aa	Predicted RBP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ZNF830	Q96NB3	372 aa	Predicted RBP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SDCBP2	Q9H190	292 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	GDAP2	Q9NXN4	497 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	CNTN6	Q9UQ52	1028 aa		13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TBKBP1	A7MCY6	615 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	KPNA7	A9QM74	516 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TMEM189-UBE2V1	I3L0A0	370 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	NRDC	O43847	1150 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	DGKI	O75912	1065 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	GFPT2	O94808	682 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	DDHD2	O94830	711 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	FGB	P02675	491 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SERPING1	P05155	500 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	PAX3	P23760	479 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	KCNJ6	P48051	423 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ZNF132	P52740	706 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	LILRA4	P59901	499 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	YWHAE	P62258	255 aa	Known RBP	13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	INCA1	Q0VD86	236 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TMEM240	Q5SV17	173 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	CYP26C1	Q6V0L0	522 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ZNF365	Q70YC5	407 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	OTOP2	Q7RTS6	562 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	LIMS2	Q7Z4I7	341 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	IRF2BP2	Q7Z5L9	587 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ZNF280B	Q86YH2	543 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TMTC1	Q8IUR5	882 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	GPIHBP1	Q8IV16	184 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	PAAF1	Q9BRP4	392 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	RC3H2	Q9HBD1	1191 aa	Known RBP	13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	CISH	Q9NSE2	258 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ARHGAP20	Q9P2F6	1191 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SNX9	Q9Y5X1	595 aa		13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.69	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ARHGAP6	O43182	974 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	UPP2	O95045	317 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	WEE2	P0C1S8	567 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	CCDC172	P0C7W6	258 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	SKIL	P12757	684 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	KRT5	P13647	590 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	IGFBP6	P24592	240 aa	Predicted RBP	13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	RAP1GAP	P47736	663 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	ARID5A	Q03989	594 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	RNASEL	Q05823	741 aa	Known RBP	13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	CD300LG	Q6UXG3	332 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	TTC39C	Q8N584	583 aa		13.68	□□□□□ -0.22
PAPSS1-208	ENST00000514815	DPF3	Q92784	378 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms