RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
USP46-209ENST00000514536 ZNF516Q92618 1163 aa15.07■□□□□ 0
USP46-209ENST00000514536 CASP10Q92851 521 aa15.07■□□□□ 0
USP46-209ENST00000514536 CGRRF1Q99675 332 aa15.07■□□□□ 0
USP46-209ENST00000514536 PCDHB8Q9UN66 801 aa15.07■□□□□ 0
USP46-209ENST00000514536 TIMM13Q9Y5L4 95 aaPredicted RBP15.07■□□□□ 0
USP46-209ENST00000514536 PPP1R3GB7ZBB8 358 aa15.06■□□□□ 0
USP46-209ENST00000514536 M0QZQ0 153 aa15.06■□□□□ 0
USP46-209ENST00000514536 ADAM12O43184 909 aa15.06■□□□□ 0
USP46-209ENST00000514536 TAF6P49848 677 aa15.06■□□□□ 0
USP46-209ENST00000514536 PMS1P54277 932 aaKnown RBP15.06■□□□□ 0
USP46-209ENST00000514536 RBP5P82980 135 aa15.06■□□□□ 0
USP46-209ENST00000514536 VARS2Q5ST30 1063 aaKnown RBP15.06■□□□□ 0
USP46-209ENST00000514536 ANKRD54Q6NXT1 300 aa15.06■□□□□ 0
USP46-209ENST00000514536 RSPO2Q6UXX9 243 aaPredicted RBP15.06■□□□□ 0
USP46-209ENST00000514536 APPL2Q8NEU8 664 aa15.06■□□□□ 0
USP46-209ENST00000514536 CXorf38Q8TB03 319 aa15.06■□□□□ 0
USP46-209ENST00000514536 GPT2Q8TD30 523 aa15.06■□□□□ 0
USP46-209ENST00000514536 PARD3BQ8TEW8 1205 aa15.06■□□□□ 0
USP46-209ENST00000514536 EEF2KMTQ96G04 330 aa15.06■□□□□ 0
USP46-209ENST00000514536 DHTKD1Q96HY7 919 aaPredicted RBP15.06■□□□□ 0
USP46-209ENST00000514536 MSLNLQ96KJ4 702 aa15.06■□□□□ 0
USP46-209ENST00000514536 SENP8Q96LD8 212 aa15.06■□□□□ 0
USP46-209ENST00000514536 TSG101Q99816 390 aa15.06■□□□□ 0
USP46-209ENST00000514536 APOL5Q9BWW9 433 aa15.06■□□□□ 0
USP46-209ENST00000514536 GZF1Q9H116 711 aaPredicted RBP15.06■□□□□ 0
USP46-209ENST00000514536 MTRRQ9UBK8 725 aa15.06■□□□□ 0
USP46-209ENST00000514536 SIX4Q9UIU6 781 aa15.06■□□□□ 0
USP46-209ENST00000514536 CD207Q9UJ71 328 aa15.06■□□□□ 0
USP46-209ENST00000514536 ITGA11Q9UKX5 1188 aa15.06■□□□□ 0
USP46-209ENST00000514536 TRIM49BA6NDI0 452 aa15.05■□□□□ -0
USP46-209ENST00000514536 PSMA7O14818 248 aa15.05■□□□□ -0
USP46-209ENST00000514536 AKAP3O75969 853 aa15.05■□□□□ -0
USP46-209ENST00000514536 GLUD1P00367 558 aa15.05■□□□□ -0
USP46-209ENST00000514536 SPATA31D3P0C874 917 aa15.05■□□□□ -0
USP46-209ENST00000514536 PAX3P23760 479 aa15.05■□□□□ -0
USP46-209ENST00000514536 CCNE1P24864 410 aa15.05■□□□□ -0
USP46-209ENST00000514536 OR1D2P34982 312 aa15.05■□□□□ -0
USP46-209ENST00000514536 MRPL58Q14197 206 aaKnown RBP15.05■□□□□ -0
USP46-209ENST00000514536 KLHL10Q6JEL2 608 aa15.05■□□□□ -0
USP46-209ENST00000514536 SYCE2Q6PIF2 218 aa15.05■□□□□ -0
USP46-209ENST00000514536 SPATA31D4Q6ZUB0 917 aa15.05■□□□□ -0
USP46-209ENST00000514536 TRAPPC11Q7Z392 1133 aa15.05■□□□□ -0
USP46-209ENST00000514536 BORCS6Q96GS4 357 aa15.05■□□□□ -0
USP46-209ENST00000514536 NUP62CLQ9H1M0 184 aa15.05■□□□□ -0
USP46-209ENST00000514536 R3HCC1Q9Y3T6 440 aaKnown RBP15.05■□□□□ -0
USP46-209ENST00000514536 BACE2Q9Y5Z0 518 aa15.05■□□□□ -0
USP46-209ENST00000514536 LRRIQ3A6PVS8 624 aaPredicted RBP15.04■□□□□ -0
USP46-209ENST00000514536 KPNA7A9QM74 516 aa15.04■□□□□ -0
USP46-209ENST00000514536 H7C4K7 107 aa15.04■□□□□ -0
USP46-209ENST00000514536 CYB561D2O14569 222 aa15.04■□□□□ -0
USP46-209ENST00000514536 CETN3O15182 167 aa15.04■□□□□ -0
USP46-209ENST00000514536 TGM5O43548 720 aa15.04■□□□□ -0
USP46-209ENST00000514536 PSMC2P35998 433 aaKnown RBP15.04■□□□□ -0
USP46-209ENST00000514536 PPP1R2P41236 205 aa15.04■□□□□ -0
USP46-209ENST00000514536 PNPLA4P41247 253 aa15.04■□□□□ -0
USP46-209ENST00000514536 DLG4P78352 724 aa15.04■□□□□ -0
USP46-209ENST00000514536 SV2CQ496J9 727 aa15.04■□□□□ -0
USP46-209ENST00000514536 CTXN3Q4LDR2 81 aa15.04■□□□□ -0
USP46-209ENST00000514536 PTCRAQ6ISU1 281 aaPredicted RBP15.04■□□□□ -0
USP46-209ENST00000514536 LILRA6Q6PI73 481 aa15.04■□□□□ -0
USP46-209ENST00000514536 FAM186BQ8IYM0 893 aa15.04■□□□□ -0
USP46-209ENST00000514536 LRRC52Q8N7C0 313 aa15.04■□□□□ -0
USP46-209ENST00000514536 C12orf76Q8N812 135 aaPredicted RBP15.04■□□□□ -0
USP46-209ENST00000514536 TRIML1Q8N9V2 468 aa15.04■□□□□ -0
USP46-209ENST00000514536 TMC2Q8TDI7 906 aa15.04■□□□□ -0
USP46-209ENST00000514536 ZNF560Q96MR9 790 aa15.04■□□□□ -0
USP46-209ENST00000514536 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
USP46-209ENST00000514536 CDY1Q9Y6F8 540 aa15.04■□□□□ -0
USP46-209ENST00000514536 PDCD11Q14690 1871 aaKnown RBP15.04■□□□□ -0
USP46-209ENST00000514536 XIRP2A4UGR9 3374 aa15.03■□□□□ -0
USP46-209ENST00000514536 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
USP46-209ENST00000514536 MAPK13O15264 365 aa15.03■□□□□ -0
USP46-209ENST00000514536 TBC1D4O60343 1298 aa15.03■□□□□ -0
USP46-209ENST00000514536 CST3P01034 146 aaPredicted RBP15.03■□□□□ -0
USP46-209ENST00000514536 BMP1P13497 986 aa15.03■□□□□ -0
USP46-209ENST00000514536 HOXB8P17481 243 aaPredicted RBP15.03■□□□□ -0
USP46-209ENST00000514536 TYMPP19971 482 aa15.03■□□□□ -0
USP46-209ENST00000514536 ARPP19P56211 112 aa15.03■□□□□ -0
USP46-209ENST00000514536 YWHAHQ04917 246 aaPredicted RBP15.03■□□□□ -0
USP46-209ENST00000514536 BFSP1Q12934 665 aa15.03■□□□□ -0
USP46-209ENST00000514536 RAB33AQ14088 237 aa15.03■□□□□ -0
USP46-209ENST00000514536 USP37Q86T82 979 aa15.03■□□□□ -0
USP46-209ENST00000514536 NELFBQ8WX92 580 aa15.03■□□□□ -0
USP46-209ENST00000514536 S1PR5Q9H228 398 aa15.03■□□□□ -0
USP46-209ENST00000514536 ANK1P16157 1881 aa15.03■□□□□ -0
USP46-209ENST00000514536 GRXCR2A6NFK2 248 aa15.02■□□□□ -0
USP46-209ENST00000514536 TNFRSF10AO00220 468 aa15.02■□□□□ -0
USP46-209ENST00000514536 PHACTR2O75167 634 aa15.02■□□□□ -0
USP46-209ENST00000514536 OAZ2O95190 189 aa15.02■□□□□ -0
USP46-209ENST00000514536 ODC1P11926 461 aa15.02■□□□□ -0
USP46-209ENST00000514536 KRT13P13646 458 aa15.02■□□□□ -0
USP46-209ENST00000514536 VAMP7P51809 220 aa15.02■□□□□ -0
USP46-209ENST00000514536 CLDN10P78369 228 aa15.02■□□□□ -0
USP46-209ENST00000514536 FKBP3Q00688 224 aaKnown RBP15.02■□□□□ -0
USP46-209ENST00000514536 LRRC63Q05C16 580 aa15.02■□□□□ -0
USP46-209ENST00000514536 PUS10Q3MIT2 529 aaKnown RBP15.02■□□□□ -0
USP46-209ENST00000514536 OVOS1Q6IE37 1185 aa15.02■□□□□ -0
USP46-209ENST00000514536 ZNF280DQ6N043 979 aa15.02■□□□□ -0
USP46-209ENST00000514536 KREMEN2Q8NCW0 462 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms