RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ANGPTL2Q9UKU9 493 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.19
NIPBL-208ENST00000514335 TAF1LQ8IZX4 1826 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 C1orf232A0A0U1RR37 186 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 CTAGE9A4FU28 777 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 ERVV-2B6SEH9 535 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 GOLGA8SH3BPF8 625 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 RIMBP2O15034 1052 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 TRAPPC3O43617 180 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 PDE6AP16499 860 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 HMOX2P30519 316 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 MXD4Q14582 209 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 TPD52L1Q16890 204 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 IL23RQ5VWK5 629 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 RAB12Q6IQ22 244 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 C6orf89Q6UWU4 347 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 USP50Q70EL3 339 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 BNIPLQ7Z465 357 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 ZNF527Q8NB42 609 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 ATL1Q8WXF7 558 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 ANKRD36BP1Q96IX9 119 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 FGD4Q96M96 766 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 FRMD8Q9BZ67 464 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 INTS2Q9H0H0 1204 aaKnown RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 NT5C3AQ9H0P0 336 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 WNT8AQ9H1J5 351 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 KIAA1586Q9HCI6 787 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 RMND1Q9NWS8 449 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 HPF1Q9NWY4 346 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 SNTG2Q9NY99 539 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 LARSQ9P2J5 1176 aaKnown RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 RABGEF1Q9UJ41 708 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 DMTF1Q9Y222 760 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 MED16Q9Y2X0 877 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 STX16-NPEPL1H3BU86 382 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 POLR2DO15514 142 aaKnown RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 PIAS2O75928 621 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 GNA14O95837 355 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 ZNF211Q13398 564 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 SQLEQ14534 574 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 EPHA7Q15375 998 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 SPATS1Q496A3 300 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 SH3D19Q5HYK7 790 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 SPECC1LQ69YQ0 1117 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 ATL3Q6DD88 541 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 CCDC149Q6ZUS6 474 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 CARFQ8N187 725 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 POC1BQ8TC44 478 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 CALML6Q8TD86 181 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 CPLX3Q8WVH0 158 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 HSPH1Q92598 858 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 INPP5DQ92835 1189 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 LRGUKQ96M69 825 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 MNTQ99583 582 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 CHCHD6Q9BRQ6 235 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 HAUS4Q9H6D7 363 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 PDE11AQ9HCR9 933 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 RRP7BPQ9NSQ0 103 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 USP40Q9NVE5 1235 aa7.64□□□□□ -1.19
NIPBL-208ENST00000514335 BRCA1P38398 1863 aaKnown RBP7.64□□□□□ -1.19
NIPBL-208ENST00000514335 TTC21BQ7Z4L5 1316 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PRR5-ARHGAP8B1AHC4 643 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 IRS4O14654 1257 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 MAGEB3O15480 346 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 THAP12O43422 761 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 LUC7L3O95232 432 aaKnown RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 FKBP9O95302 570 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ANP32DO95626 131 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ICAM2P13598 275 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ATP1A3P13637 1013 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PDGFRAP16234 1089 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 MTIF2P46199 727 aaKnown RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ARSDP51689 593 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 NKX2-5P52952 324 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PPP2R2BQ00005 443 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 CYLC2Q14093 348 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 DOC2AQ14183 400 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 VEPH1Q14D04 833 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 EFHC1Q5JVL4 640 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 C1orf185Q5T7R7 199 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 RNF220Q5VTB9 566 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 KLHDC7AQ5VTJ3 777 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 AAGABQ6PD74 315 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TTC23LQ6PF05 361 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 CPLX4Q7Z7G2 160 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 WDR49Q8IV35 697 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ST13P4Q8IZP2 240 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 FUKQ8N0W3 1084 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 REXO1Q8N1G1 1221 aaKnown RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PLPP7Q8NBV4 271 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PIK3C3Q8NEB9 887 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 SSH3Q8TE77 659 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 HIC2Q96JB3 615 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TRIM62Q9BVG3 475 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 IARS2Q9NSE4 1012 aaKnown RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 FAM8A1Q9UBU6 413 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 MBD1Q9UIS9 605 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 SESN1Q9Y6P5 492 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 RTL1A6NKG5 1358 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms