RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MTFR1Q15390 333 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 CEP55Q53EZ4 464 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 TAPT1Q6NXT6 567 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 DTHD1Q6ZMT9 781 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 SESTD1Q86VW0 696 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 MFN1Q8IWA4 741 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 ALDH16A1Q8IZ83 802 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 CACNA2D3Q8IZS8 1091 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 KLHDC9Q8NEP7 349 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 MDM1Q8TC05 714 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 C10orf82Q8WW14 230 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 SYT15Q9BQS2 421 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 EPB41L1Q9H4G0 881 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 SSU72Q9NP77 194 aaKnown RBP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 COL1A2P08123 1366 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 hCG_1642624A0A1W2PR95 340 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 MEIS1O00470 390 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 TTI1O43156 1089 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 PRPF4O43172 522 aaKnown RBP eCLIP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 DAPK3O43293 454 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 ASMTLO95671 621 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 GNA14O95837 355 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 FTCDO95954 541 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 SPATA31C1P0DKV0 1188 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 RARGP13631 454 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 UCHL3P15374 230 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 ZNF76P36508 570 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 RPL21P46778 160 aaKnown RBP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 CASP5P51878 434 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 JAK3P52333 1124 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 EGFLAMQ63HQ2 1017 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 ZNF746Q6NUN9 644 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 CCDC62Q6P9F0 684 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 METTL7BQ6UX53 244 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 PPTC7Q8NI37 304 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 MIPEPQ99797 713 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 RAB34Q9BZG1 259 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 GNEQ9Y223 722 aaKnown RBP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 DOCK3Q8IZD9 2030 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 A0A1B0GUA9 196 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 TGFB1I1O43294 461 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 HOXA2O43364 376 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 DNAJC6O75061 913 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 CSDE1O75534 798 aaKnown RBP7.9□□□□□ -1.15
CLIP1-205ENST00000514271 TAC1P20366 129 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 ATP4AP20648 1035 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 BIRC2Q13490 618 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 RPUSD2Q8IZ73 545 aaKnown RBP7.9□□□□□ -1.15
CLIP1-205ENST00000514271 FAM167AQ96KS9 214 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 TIPINQ9BVW5 301 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 RAB17Q9H0T7 212 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 ZDHHC7Q9NXF8 308 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 PLA2G4CQ9UP65 541 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 STARD13Q9Y3M8 1113 aa7.9□□□□□ -1.15
CLIP1-205ENST00000514271 EMSYQ7Z589 1322 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 TYROBPO43914 113 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 FOXN2P32314 431 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 OCRLQ01968 901 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 BTKQ06187 659 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 RRAGAQ7L523 313 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 RSPH9Q9H1X1 276 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 HSFX1Q9UBD0 423 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 L3MBTL1Q9Y468 752 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 DPPA5A6NC42 116 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 PENKP01210 267 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 PGK2P07205 417 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 DHRS4L1P0CG22 281 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 CYP11B2P19099 503 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 CTNNA1P35221 906 aaKnown RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 SNX17Q15036 470 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 CELF3Q5SZQ8 465 aaKnown RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 FKBP15Q5T1M5 1219 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 GKAP1Q5VSY0 366 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 FAM160B1Q5W0V3 765 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 NECAB2Q7Z6G3 386 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 RSPH1Q8WYR4 309 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 IRGQQ8WZA9 623 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 LARP4BQ92615 738 aaKnown RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 MTG1Q9BT17 334 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 PHACTR1Q9C0D0 580 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 RNF208Q9H0X6 261 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 KCNK13Q9HB14 408 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 XPNPEP3Q9NQH7 507 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 FETUBQ9UGM5 382 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 NOCTQ9UK39 431 aaKnown RBP7.89□□□□□ -1.15
CLIP1-205ENST00000514271 KIAA1024Q9UPX6 916 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 CHKBQ9Y259 395 aa7.89□□□□□ -1.15
CLIP1-205ENST00000514271 EML1O00423 815 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TLR3O15455 904 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 BUB1O43683 1085 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 GGPS1O95749 300 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 ABHD2P08910 425 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TBX4P57082 545 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TNNC1P63316 161 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 FKBP3Q00688 224 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CNTN2Q02246 1040 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 PTP4A2Q12974 167 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 SFMBT2Q5VUG0 894 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms