RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SMARCE1Q969G3 411 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 MSLNLQ96KJ4 702 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 KLHL5Q96PQ7 755 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 POP1Q99575 1024 aaKnown RBP8.86□□□□□ -0.99
NEDD4-210ENST00000513957 PAAF1Q9BRP4 392 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 FAM213AQ9BRX8 229 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 PLEKHA4Q9H4M7 779 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 GOLGA2P5Q9HBQ8 144 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 MTRRQ9UBK8 725 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 PRKAG3Q9UGI9 489 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 CD207Q9UJ71 328 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 ITGA11Q9UKX5 1188 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 DSEQ9UL01 958 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 MAFFQ9ULX9 164 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 TRAF3IP3Q9Y228 551 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 BACE2Q9Y5Z0 518 aa8.86□□□□□ -0.99
NEDD4-210ENST00000513957 TCF20Q9UGU0 1960 aaKnown RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 ANO9A1A5B4 782 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 GOLGA6L22H0YM25 854 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 M0QZQ0 153 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 PIRO00625 290 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 GLUD1P00367 558 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 NFICP08651 508 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 CNPP09543 421 aaKnown RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 TMEM191BP0C7N4 346 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 TYMPP19971 482 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 RPL13P26373 211 aaKnown RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 KLRC2P26717 231 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 MCM4P33991 863 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 STIM1Q13586 685 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 PSMD6Q15008 389 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 PSMD5Q16401 504 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 EDRF1Q3B7T1 1238 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 SV2CQ496J9 727 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 ZNF658Q5TYW1 1059 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 C9orf57Q5W0N0 161 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 SLC8B1Q6J4K2 584 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 ANKRD54Q6NXT1 300 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 C15orf39Q6ZRI6 1047 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 RBM23Q86U06 439 aaKnown RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 NELFCDQ8IXH7 590 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 LRRC52Q8N7C0 313 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 TRIML1Q8N9V2 468 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 C3orf58Q8NDZ4 430 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 CMASQ8NFW8 434 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 LNX1Q8TBB1 728 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 RIN2Q8WYP3 895 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 SLC39A7Q92504 469 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 C18orf25Q96B23 403 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 SAAL1Q96ER3 474 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 ANKRD36BP1Q96IX9 119 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 NECTIN4Q96NY8 510 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 CXCL16Q9H2A7 254 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 KCTD10Q9H3F6 313 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 IGFLR1Q9H665 355 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 SFXN1Q9H9B4 322 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 KIAA1522Q9P206 1035 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-210ENST00000513957 TUBGCP4Q9UGJ1 667 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 FRMD4BQ9Y2L6 1034 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 PCDHGC5Q9Y5F6 944 aa8.85□□□□□ -0.99
NEDD4-210ENST00000513957 F8W810 466 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 C2CD2LO14523 706 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 PER2O15055 1255 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 TEX28O15482 410 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 EXOC3O60645 756 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 CSPG5O95196 566 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 TNNC2P02585 160 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 POU2F2P09086 479 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 ODC1P11926 461 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 HOXA9P31269 272 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 TAF6P49848 677 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 LILRA4P59901 499 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 CLDN10P78369 228 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 LRRC63Q05C16 580 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 PNOCQ13519 176 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 SMAD2Q15796 467 aaKnown RBP8.84□□□□□ -0.99
NEDD4-210ENST00000513957 DUOXA2Q1HG44 320 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 RTP2Q5QGT7 225 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 PTCRAQ6ISU1 281 aaPredicted RBP8.84□□□□□ -0.99
NEDD4-210ENST00000513957 ZNF280DQ6N043 979 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 CES5AQ6NT32 575 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 CD300LGQ6UXG3 332 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 EFCAB13Q8IY85 973 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 HASPINQ8TF76 798 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 SLC22A17Q8WUG5 538 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 PTCD2Q8WV60 388 aaKnown RBP8.84□□□□□ -0.99
NEDD4-210ENST00000513957 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 MFSD14AQ96MC6 490 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 FNBP1Q96RU3 617 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 ADAM7Q9H2U9 754 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 PCIF1Q9H4Z3 704 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 PRDM6Q9NQX0 595 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 INTS13Q9NVM9 706 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 DMAC2Q9NW81 257 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 ZDHHC7Q9NXF8 308 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 DPP3Q9NY33 737 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 CLEC1BQ9P126 229 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 R3HCC1Q9Y3T6 440 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms