RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CCDC195A0A1B0GUA6 201 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 ARHGEF37A1IGU5 675 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 GOLGA8IPA6NC78 632 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 ZNF233A6NK53 670 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 GOLGA8JA6NMD2 632 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 VNN2O95498 520 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 RPN1P04843 607 aaKnown RBP10.51□□□□□ -0.73
RNF4-221ENST00000513643 HNRNPA1P09651 372 aaKnown RBP eCLIP10.51□□□□□ -0.73
RNF4-221ENST00000513643 WEE2P0C1S8 567 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 SPATA31D3P0C874 917 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 ATF2P15336 505 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 KCNA4P22459 653 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 CA8P35219 290 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 CLDN10P78369 228 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 MYBPC2Q14324 1141 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 NFIL3Q16649 462 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 ARMCX5Q6P1M9 558 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 RNF135Q8IUD6 432 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 ZDHHC14Q8IZN3 488 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 SENP8Q96LD8 212 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 MFSD14AQ96MC6 490 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 RIPOR3Q96MK2 946 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 TIGD1Q96MW7 591 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 RTP3Q9BQQ7 232 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 OXCT2Q9BYC2 517 aaPredicted RBP10.51□□□□□ -0.73
RNF4-221ENST00000513643 EPHX3Q9H6B9 360 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 PDE11AQ9HCR9 933 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 WDR6Q9NNW5 1121 aaKnown RBP10.51□□□□□ -0.73
RNF4-221ENST00000513643 C11orf16Q9NQ32 467 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 RBAKQ9NYW8 714 aaPredicted RBP10.51□□□□□ -0.73
RNF4-221ENST00000513643 SIX4Q9UIU6 781 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 NUB1Q9Y5A7 615 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 CDY1Q9Y6F8 540 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 PTPRJQ12913 1337 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 PLXNA3P51805 1871 aa10.51□□□□□ -0.73
RNF4-221ENST00000513643 SCN1AP35498 2009 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 WDR27A2RRH5 827 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 H7C4K7 107 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 PDXKO00764 312 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 N4BP1O75113 896 aaKnown RBP10.5□□□□□ -0.73
RNF4-221ENST00000513643 MCM4P33991 863 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 ROR1Q01973 937 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 PSMD6Q15008 389 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 SNRNP35Q16560 246 aaKnown RBP10.5□□□□□ -0.73
RNF4-221ENST00000513643 COBLL1Q53SF7 1204 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 TPGS2Q68CL5 300 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 TCEAL8Q8IYN2 117 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 LRRC52Q8N7C0 313 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 XXYLT1Q8NBI6 393 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 PLEKHO2Q8TD55 490 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 FAM212AQ96EL1 285 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 INTS13Q9NVM9 706 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 GDAP2Q9NXN4 497 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 TECTAO75443 2155 aa10.5□□□□□ -0.73
RNF4-221ENST00000513643 OR6C75A6NL08 312 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 C2CD4DB7Z1M9 353 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 CLIC2O15247 247 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 GPR37L1O60883 481 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 SEC24AO95486 1093 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 PNPLA4P41247 253 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 CYP24A1Q07973 514 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 GPR17Q13304 367 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 SURF1Q15526 300 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 ZCWPW2Q504Y3 356 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 CLEC17AQ6ZS10 378 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 HS2ST1Q7LGA3 356 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 GLYCTKQ8IVS8 523 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 NELFCDQ8IXH7 590 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 GUF1Q8N442 669 aaKnown RBP10.49□□□□□ -0.73
RNF4-221ENST00000513643 OR5B17Q8NGF7 314 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 CACTINQ8WUQ7 758 aaKnown RBP10.49□□□□□ -0.73
RNF4-221ENST00000513643 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 FAM84AQ96KN4 292 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 RPGRIP1Q96KN7 1286 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 AVENQ9NQS1 362 aaPredicted RBP10.49□□□□□ -0.73
RNF4-221ENST00000513643 EXOC1Q9NV70 894 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 AFF4Q9UHB7 1163 aaKnown RBP10.49□□□□□ -0.73
RNF4-221ENST00000513643 ITGA11Q9UKX5 1188 aa10.49□□□□□ -0.73
RNF4-221ENST00000513643 TIMM13Q9Y5L4 95 aaPredicted RBP10.49□□□□□ -0.73
RNF4-221ENST00000513643 DOCK6Q96HP0 2047 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
RNF4-221ENST00000513643 KPNA7A9QM74 516 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 GABRDO14764 452 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 DCXO43602 365 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
RNF4-221ENST00000513643 C8AP07357 584 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 ALADP13716 330 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 SSTR3P32745 418 aaPredicted RBP10.48□□□□□ -0.73
RNF4-221ENST00000513643 TAF6P49848 677 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 YWHAHQ04917 246 aaPredicted RBP10.48□□□□□ -0.73
RNF4-221ENST00000513643 DUOXA2Q1HG44 320 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 CTXN3Q4LDR2 81 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 ZNF280DQ6N043 979 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 DSTYKQ6XUX3 929 aa10.48□□□□□ -0.73
RNF4-221ENST00000513643 WDR49Q8IV35 697 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms