RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GTF2H1P32780 548 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 BMPR1AP36894 532 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 PBX3P40426 434 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 SLC11A1P49279 550 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 CLCNKBP51801 687 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ERVK-21P61565 698 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 TPM4P67936 248 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 TAP1Q03518 808 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 BIRC3Q13489 604 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 KCNJ12Q14500 433 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 IQCB1Q15051 598 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 MAN2A1Q16706 1144 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 UPP1Q16831 310 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ZACNQ401N2 412 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 HSP90AA4PQ58FG1 418 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 TCP11X2Q5H9J9 407 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 TDRD10Q5VZ19 366 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 C9orf57Q5W0N0 161 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 KRT39Q6A163 491 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 C15orf39Q6ZRI6 1047 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 TRAPPC11Q7Z392 1133 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 IRF2BP1Q8IU81 584 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 DHX40Q8IX18 779 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 SLC39A11Q8N1S5 342 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 LRRC52Q8N7C0 313 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ANKRD20A12PQ8NF67 263 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 OR5B17Q8NGF7 314 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 TMEM169Q96HH4 297 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 POP1Q99575 1024 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 PAAF1Q9BRP4 392 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 CBX8Q9HC52 389 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 FANCLQ9NW38 375 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 MARCH5Q9NX47 278 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 SPG21Q9NZD8 308 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 CACNG4Q9UBN1 327 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 ADAM28Q9UKQ2 775 aa8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 PRG3Q9Y2Y8 225 aaPredicted RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.18□□□□□ -1.1
HMGXB3-204ENST00000513318 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 MYO16Q9Y6X6 1858 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 CHD9Q3L8U1 2897 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 NT5C1B-RDH14C9J2C7 533 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 GOLGA6L19H0YKK7 550 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PIRO00625 290 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 TRIM66O15016 1216 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PMM2O15305 246 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 P4HA2O15460 535 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PHACTR2O75167 634 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 B3GAT3O94766 335 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 KIF4AO95239 1232 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 AFPP02771 609 aaKnown RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 C4BPAP04003 597 aaKnown RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 TPM2P07951 284 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 KRT19P08727 400 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF18P17022 549 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PAX3P23760 479 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PNPLA4P41247 253 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PIK3CAP42336 1068 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 GCLMP48507 274 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 FMO5P49326 533 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 TAF6P49848 677 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 GUCY2FP51841 1108 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 RBP5P82980 135 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 MYL7Q01449 175 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 PPP3CAQ08209 521 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 ELAVL2Q12926 359 aaKnown RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 SV2CQ496J9 727 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 EPC2Q52LR7 807 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 FUT10Q6P4F1 479 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 LUZP1Q86V48 1076 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 TMEM173Q86WV6 379 aaPredicted RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 C3orf58Q8NDZ4 430 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 FBXL13Q8NEE6 735 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 IGSF21Q96ID5 467 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 TUBGCP2Q9BSJ2 902 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 C17orf80Q9BSJ5 609 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 C11orf84Q9BUA3 381 aaPredicted RBP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 IMPG2Q9BZV3 1241 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 HSD3B7Q9H2F3 369 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 MMRN2Q9H8L6 949 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 STK39Q9UEW8 545 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 SIX4Q9UIU6 781 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 NUB1Q9Y5A7 615 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 SF3B1O75533 1304 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 TRANK1O15050 2925 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms