RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NUP62CLQ9H1M0 184 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 KIAA1586Q9HCI6 787 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 PIH1D1Q9NWS0 290 aaKnown RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 SIDT1Q9NXL6 827 aaKnown RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 EIF2B4Q9UI10 523 aaKnown RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 ITSN2Q9NZM3 1697 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 TNRQ92752 1358 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 KDM5CP41229 1560 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 ABCA6Q8N139 1617 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 ABCC5O15440 1437 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 TBC1D4O60343 1298 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 RECQL4O94761 1208 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 HAUS5O94927 633 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 RHCEP18577 417 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 COMTP21964 271 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 PEX2P28328 305 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 PCSK1P29120 753 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 SLC7A1P30825 629 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 HIBADHP31937 336 aaKnown RBP5.16□□□□□ -1.58
HTT-210ENST00000512909 FXR1P51114 621 aaKnown RBP eCLIP5.16□□□□□ -1.58
HTT-210ENST00000512909 RAB1AP62820 205 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 NOMO3P69849 1222 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 RHDQ02161 417 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 HABP2Q14520 560 aaPredicted RBP5.16□□□□□ -1.58
HTT-210ENST00000512909 PLS1Q14651 629 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 ZFYVE27Q5T4F4 411 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 TCTN3Q6NUS6 607 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 FOXR2Q6PJQ5 311 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 SEM1Q6ZVN7 128 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 DOK3Q7L591 496 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 LIMS2Q7Z4I7 341 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 C1QL4Q86Z23 238 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 FUKQ8N0W3 1084 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 PCSK9Q8NBP7 692 aaKnown RBP5.16□□□□□ -1.58
HTT-210ENST00000512909 PJA1Q8NG27 643 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 TBC1D15Q8TC07 691 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 CEP95Q96GE4 821 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 BORCS6Q96GS4 357 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 PTPN18Q99952 460 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 ZNF287Q9HBT7 754 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 PPP4R1LQ9P1A2 415 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 HECAQ9UBI9 543 aaPredicted RBP5.16□□□□□ -1.58
HTT-210ENST00000512909 PCDHA6Q9UN73 950 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 DUSP10Q9Y6W6 482 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 KIDINS220Q9ULH0 1771 aa5.16□□□□□ -1.58
HTT-210ENST00000512909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.16□□□□□ -1.58
HTT-210ENST00000512909 FGD6Q6ZV73 1430 aa5.15□□□□□ -1.58
HTT-210ENST00000512909 LMTK3Q96Q04 1460 aa5.15□□□□□ -1.58
HTT-210ENST00000512909 AGLP35573 1532 aa5.15□□□□□ -1.58
HTT-210ENST00000512909 MAP3K1Q13233 1512 aa5.15□□□□□ -1.58
HTT-210ENST00000512909 A0A088AWK7 358 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 MATN2O00339 956 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 ERN1O75460 977 aaKnown RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 STC2O76061 302 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 BRAFP15056 766 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 ZKSCAN1P17029 563 aaPredicted RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 ADAM8P78325 824 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 PLP2Q04941 152 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 BIRC2Q13490 618 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 IDI1Q13907 227 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 NFIXQ14938 502 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 UBXN2BQ14CS0 331 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 POLD3Q15054 466 aaPredicted RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 BMT2Q1RMZ1 405 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 MAP9Q49MG5 647 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 AMOTQ4VCS5 1084 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 CCDC93Q567U6 631 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 ZNF783Q6ZMS7 281 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 CHST15Q7LFX5 561 aaPredicted RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 LILRA3Q8N6C8 439 aaPredicted RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 RNF169Q8NCN4 708 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 OR10H5Q8NGA6 315 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 DDX17Q92841 729 aaKnown RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 SUCLG2Q96I99 432 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 MPHOSPH6Q99547 160 aaKnown RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 BDH2Q9BUT1 245 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 GPR87Q9BY21 358 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 GSTO2Q9H4Y5 243 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 AGO3Q9H9G7 860 aaKnown RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 PCDHGB6Q9Y5F9 930 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 SLC30A1Q9Y6M5 507 aa5.15□□□□□ -1.59
HTT-210ENST00000512909 ZNF335Q9H4Z2 1342 aaPredicted RBP5.15□□□□□ -1.59
HTT-210ENST00000512909 DAPK1P53355 1430 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 SIGLEC1Q9BZZ2 1709 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 FER1L4A9Z1Z3 1794 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 RHPN2P1A8MT19 583 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 K7ESM1 405 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 ZNF623O75123 536 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 ANXA1P04083 346 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 GJB1P08034 283 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 MYL3P08590 195 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 KITP10721 976 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 RPL17P18621 184 aaKnown RBP5.14□□□□□ -1.59
HTT-210ENST00000512909 PSMC1P62191 440 aaKnown RBP5.14□□□□□ -1.59
HTT-210ENST00000512909 FOXL1Q12952 345 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 LCNL1Q6ZST4 164 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 MED25Q71SY5 747 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 MDGA1Q8NFP4 955 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 OR6B3Q8NGW1 331 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 PGBD4Q96DM1 585 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms