RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 DPYSL4O14531 572 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 CAVIN2O95810 425 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 CPA1P15085 419 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 SPINK2P20155 84 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 HOXC13P31276 330 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 PXNP49023 591 aaPredicted RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 EVCP57679 992 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 CCT2P78371 535 aaKnown RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 ELF2Q15723 593 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 GLRA4Q5JXX5 417 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 MCPH1Q8NEM0 835 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 SHKBP1Q8TBC3 707 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 RSPRY1Q96DX4 576 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 KIF12Q96FN5 646 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 DUSP15Q9H1R2 295 aaPredicted RBP12.71□□□□□ -0.37
RNF4-216ENST00000511859 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 OBP2AQ9NY56 170 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 PCDHA12Q9UN75 941 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 CACNA1EQ15878 2313 aa12.71□□□□□ -0.37
RNF4-216ENST00000511859 SMIM28A0A1B0GU29 152 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 TAF4O00268 1085 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 PRKCBP05771 671 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 PLD1Q13393 1074 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 CTXN3Q4LDR2 81 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 TCEAL6Q6IPX3 200 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 TCEAL3Q969E4 200 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 GOLGA2P5Q9HBQ8 144 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
RNF4-216ENST00000511859 NEUROG3Q9Y4Z2 214 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 THADAQ6YHU6 1953 aa12.7□□□□□ -0.38
RNF4-216ENST00000511859 A0A1W2PRU2 124 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 PODXLO00592 558 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 USO1O60763 962 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 WEE1P30291 646 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 RPL9P32969 192 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 CREB5Q02930 508 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 GRSF1Q12849 480 aaKnown RBP eCLIP12.69□□□□□ -0.38
RNF4-216ENST00000511859 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 XKR4Q5GH76 650 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ZNF280DQ6N043 979 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ALKAL1Q6UXT8 129 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 MAEAQ7L5Y9 396 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 APPL2Q8NEU8 664 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 PIGOQ8TEQ8 1089 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 KCNB2Q92953 911 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 LRRC3Q9BY71 257 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 GPRC5CQ9NQ84 441 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 TOPORSQ9NS56 1045 aaPredicted RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 THG1LQ9NWX6 298 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 NUB1Q9Y5A7 615 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 NUP210Q8TEM1 1887 aaPredicted RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 CITO14578 2027 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ASXL3Q9C0F0 2248 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ADAMTS20P59510 1910 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ITPR1Q14643 2758 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ACACAQ13085 2346 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 LNP1A1A4G5 178 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 CPLX1O14810 134 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 KHNYNO15037 678 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 FGF19O95750 216 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 TOP3BO95985 862 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 RPS6KB1P23443 525 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 PKN3Q6P5Z2 889 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 BEST2Q8NFU1 509 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 BPIFB1Q8TDL5 484 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 LRRC3BQ96PB8 259 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 OXCT2Q9BYC2 517 aaPredicted RBP12.69□□□□□ -0.38
RNF4-216ENST00000511859 CCDC113Q9H0I3 377 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 EBF1Q9UH73 591 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 MSRB2Q9Y3D2 182 aa12.69□□□□□ -0.38
RNF4-216ENST00000511859 HELZ2Q9BYK8 2649 aaKnown RBP12.68□□□□□ -0.38
RNF4-216ENST00000511859 TRDMT1O14717 391 aaKnown RBP12.68□□□□□ -0.38
RNF4-216ENST00000511859 NAMPTP43490 491 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 EFNA5P52803 228 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 EPHB3P54753 998 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 AMPD2Q01433 879 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 SOX4Q06945 474 aaPredicted RBP12.68□□□□□ -0.38
RNF4-216ENST00000511859 CPLX2Q6PUV4 134 aaKnown RBP12.68□□□□□ -0.38
RNF4-216ENST00000511859 RNF19BQ6ZMZ0 732 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 TMC8Q8IU68 726 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms