RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 TCEAL8Q8IYN2 117 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 NXPE3Q969Y0 559 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 ACCSQ96QU6 501 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
CHFR-208ENST00000511001 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 PANK4Q9NVE7 773 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
CHFR-208ENST00000511001 CDH7Q9ULB5 785 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 DERAQ9Y315 318 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
CHFR-208ENST00000511001 MIA3Q5JRA6 1907 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 PRPF6O94906 941 aaKnown RBP13.06□□□□□ -0.32
CHFR-208ENST00000511001 RHOP08100 348 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
CHFR-208ENST00000511001 NPR3P17342 541 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 ELF1P32519 619 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 PTPN5P54829 565 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 LILRA4P59901 499 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 POSTNQ15063 836 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 PABPC1LQ4VXU2 614 aaKnown RBP13.06□□□□□ -0.32
CHFR-208ENST00000511001 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 NPAS3Q8IXF0 933 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 TMEM105Q8N8V8 129 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 POMGNT1Q8WZA1 660 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 FGF13Q92913 245 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 FGF14Q92915 247 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 DHX58Q96C10 678 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 TRIM9Q9C026 710 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 CYP4F11Q9HBI6 524 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
CHFR-208ENST00000511001 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 C2CD2Q9Y426 696 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 INSL5Q9Y5Q6 135 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 ZFP37Q9Y6Q3 630 aaPredicted RBP13.06□□□□□ -0.32
CHFR-208ENST00000511001 NUMBLQ9Y6R0 609 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
CHFR-208ENST00000511001 KRBA1A5PL33 1030 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 NRG2O14511 850 aaPredicted RBP13.05□□□□□ -0.32
CHFR-208ENST00000511001 LRG1P02750 347 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 OR4Q2P0C623 313 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 SRFP11831 508 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 TYMPP19971 482 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 GARTP22102 1010 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 YWHAHQ04917 246 aaPredicted RBP13.05□□□□□ -0.32
CHFR-208ENST00000511001 ADCY1Q08828 1119 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 ALCAMQ13740 583 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 PRSS36Q5K4E3 855 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 DSTYKQ6XUX3 929 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 BRSK2Q8IWQ3 736 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 ING5Q8WYH8 240 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 HPS3Q969F9 1004 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 BORCS6Q96GS4 357 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 SENP8Q96LD8 212 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 TMEM209Q96SK2 561 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 CBWD1Q9BRT8 395 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 CRISPLD1Q9H336 500 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 CUEDC2Q9H467 287 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 FAM86C1Q9NVL1 165 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 COL4A3Q01955 1670 aa13.05□□□□□ -0.32
CHFR-208ENST00000511001 PRRG1O14668 218 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 IL18RAPO95256 599 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CYP11A1P05108 521 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 HSP90AA1P07900 732 aaKnown RBP13.04□□□□□ -0.32
CHFR-208ENST00000511001 CFHP08603 1231 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CPB1P15086 417 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CEBPBP17676 345 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 PTPN2P17706 415 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 HOXD13P35453 343 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CCR2P41597 374 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CLCN5P51795 746 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
CHFR-208ENST00000511001 SCARA3Q6AZY7 606 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
CHFR-208ENST00000511001 OVOS1Q6IE37 1185 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CNNM4Q6P4Q7 775 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 PRRX2Q99811 253 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 FAM213AQ9BRX8 229 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 CEP72Q9P209 647 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 WNT16Q9UBV4 365 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 MAFFQ9ULX9 164 aa13.04□□□□□ -0.32
CHFR-208ENST00000511001 MRPS23Q9Y3D9 190 aaKnown RBP13.04□□□□□ -0.32
CHFR-208ENST00000511001 PTPRZ1P23471 2315 aaPredicted RBP13.04□□□□□ -0.32
CHFR-208ENST00000511001 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
CHFR-208ENST00000511001 COL4A2P08572 1712 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
CHFR-208ENST00000511001 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms