RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 FLYWCH1Q4VC44 716 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 PABPC1LQ4VXU2 614 aaKnown RBP4.86□□□□□ -1.63
CAST-229ENST00000510098 ATXN7L2Q5T6C5 722 aaPredicted RBP4.86□□□□□ -1.63
CAST-229ENST00000510098 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 KSR2Q6VAB6 950 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 LRRC55Q6ZSA7 311 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 SEM1Q6ZVN7 128 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 UBE3BQ7Z3V4 1068 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 SRGAP1Q7Z6B7 1085 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 LDLRAD3Q86YD5 345 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 CCDC146Q8IYE0 955 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 DCBLD1Q8N8Z6 715 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 PROKR1Q8TCW9 393 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 TTC17Q96AE7 1141 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 LRFN3Q9BTN0 628 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 PACSIN1Q9BY11 444 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 TMEM60Q9H2L4 133 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 WDCPQ9H6R7 721 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 CNNM1Q9NRU3 951 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 GNL3LQ9NVN8 582 aaKnown RBP4.86□□□□□ -1.63
CAST-229ENST00000510098 PNPOQ9NVS9 261 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 SLC23A1Q9UHI7 598 aa4.86□□□□□ -1.63
CAST-229ENST00000510098 CAPN8A6NHC0 703 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 TPP1O14773 563 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 PEX14O75381 377 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 NCR1O76036 304 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 POMCP01189 267 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 MYL1P05976 194 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 HLA-DOAP06340 250 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 FTH1P19P0C7X4 201 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 TYRP14679 529 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 CHN2P52757 468 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 RAB1AP62820 205 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 MXRA7P84157 204 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 PLS1Q14651 629 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 PDCD4Q53EL6 469 aaKnown RBP4.85□□□□□ -1.63
CAST-229ENST00000510098 DACT2Q5SW24 774 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 FAM102AQ5T9C2 384 aaPredicted RBP4.85□□□□□ -1.63
CAST-229ENST00000510098 METRNLQ641Q3 311 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 CCSAPQ6IQ19 270 aaPredicted RBP4.85□□□□□ -1.63
CAST-229ENST00000510098 MRGPRGQ86SM5 289 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 VRK3Q8IV63 474 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
CAST-229ENST00000510098 PHACTR3Q96KR7 559 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 NEU1Q99519 415 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 TTPALQ9BTX7 342 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 REXO4Q9GZR2 422 aaKnown RBP4.85□□□□□ -1.63
CAST-229ENST00000510098 SLITRK6Q9H5Y7 841 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 SARS2Q9NP81 518 aaKnown RBP4.85□□□□□ -1.63
CAST-229ENST00000510098 SLAMF7Q9NQ25 335 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 HS3ST4Q9Y661 456 aa4.85□□□□□ -1.63
CAST-229ENST00000510098 A0A087X1B8 175 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 CFAP69A5D8W1 941 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 DRGXA6NNA5 263 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 A6NNZ2 444 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 F2RL2O00254 374 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 PLIN1O60240 522 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 LPXNO60711 386 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 RAMP2O60895 175 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 ZBED1O96006 694 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 GNAI3P08754 354 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 AGFG1P52594 562 aaKnown RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 CACNB3P54284 484 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 USP14P54578 494 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 GNAI1P63096 354 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 NKX6-1P78426 367 aaPredicted RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 PURAQ00577 322 aaKnown RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 FGL2Q14314 439 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 KIAA0753Q2KHM9 967 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 TMED8Q6PL24 325 aaPredicted RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 CHST15Q7LFX5 561 aaPredicted RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 AOPEPQ8N6M6 819 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 FAM156AQ8NDB6 213 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 MYEOVQ96EZ4 313 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 PRDM16Q9HAZ2 1276 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 STAP2Q9UGK3 403 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 CPA4Q9UI42 421 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 FAM50BQ9Y247 325 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
CAST-229ENST00000510098 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
CAST-229ENST00000510098 A0A088AWK7 358 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 CENPVL1A0A0U1RR11 272 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 A0A1W2PPL8 197 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 NT5C1B-RDH14C9J2C7 533 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 EIF3JO75822 258 aaKnown RBP4.83□□□□□ -1.64
CAST-229ENST00000510098 HAUS5O94927 633 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 NDUFA10O95299 355 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 SBK3P0C264 359 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 RHCEP18577 417 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 PRDX5P30044 214 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 PIK3CGP48736 1102 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 FAM193AP78312 1265 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 GPSM2P81274 684 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 RHDQ02161 417 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 UBXN2BQ14CS0 331 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
CAST-229ENST00000510098 COBLL1Q53SF7 1204 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms