RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SPA17Q15506 151 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 GLRA4Q5JXX5 417 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 C9orf57Q5W0N0 161 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 ZNF677Q86XU0 584 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 FAM71AQ8IYT1 594 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 SCLYQ96I15 445 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 PI4K2AQ9BTU6 479 aa17.93■□□□□ 0.46
SCAMP1-203ENST00000510030 PIRO00625 290 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 AKR1B10O60218 316 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 LRRN2O75325 713 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 CCDC175P0C221 793 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 APBA1Q02410 837 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 PTK2Q05397 1052 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 GOLGA8FQ08AF8 430 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 GOLGA8DPQ0D2H9 430 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 PPIGQ13427 754 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 TUSC3Q13454 348 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 GPNMBQ14956 572 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 C10orf76Q5T2E6 689 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 PPP1R2P3Q6NXS1 205 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 GJB7Q6PEY0 223 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 WDR59Q6PJI9 974 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 DPH6Q7L8W6 267 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 CXorf38Q8TB03 319 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 LINC01599Q8WXQ3 324 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 ZFP42Q96MM3 310 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 KREMEN1Q96MU8 473 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 BCO2Q9BYV7 579 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 OSBPL7Q9BZF2 842 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 NHEJ1Q9H9Q4 299 aaPredicted RBP17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 TUBGCP4Q9UGJ1 667 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 CNTN6Q9UQ52 1028 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 NUB1Q9Y5A7 615 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 MICAL3Q7RTP6 2002 aa17.92■□□□□ 0.46
SCAMP1-203ENST00000510030 DNAH12Q6ZR08 3092 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 KRT5P13647 590 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 USP8P40818 1118 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 SCNN1GP51170 649 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 NOMO2Q5JPE7 1267 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 DEFB128Q7Z7B8 93 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 RTN4RL1Q86UN2 441 aaPredicted RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 SPATA18Q8TC71 538 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 LPPQ93052 612 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 TATDN2Q93075 761 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 C18orf25Q96B23 403 aaPredicted RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 ZNF830Q96NB3 372 aaPredicted RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 FAM193BQ96PV7 902 aaPredicted RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 APOBEC3GQ9HC16 384 aaKnown RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 KCND1Q9NSA2 647 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 GDAP2Q9NXN4 497 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 EPN1Q9Y6I3 576 aaPredicted RBP17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 SCN5AQ14524 2016 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 LTBP2Q14767 1821 aa17.91■□□□□ 0.46
SCAMP1-203ENST00000510030 KPNA7A9QM74 516 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 EIF3CLB5ME19 914 aaKnown RBP17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 FOXN3O00409 490 aaPredicted RBP17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 NDUFA10O95299 355 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 AMHP03971 560 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 ASPAP45381 313 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 ARID5AQ03989 594 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 RNASELQ05823 741 aaKnown RBP17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 HGSNATQ68CP4 663 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 IRF2BP2Q7Z5L9 587 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 GSTCDQ8NEC7 633 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 EIF3CQ99613 913 aaKnown RBP17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 GPR88Q9GZN0 384 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 ARHGAP20Q9P2F6 1191 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 NXF1Q9UBU9 619 aaKnown RBP17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 PCDHB4Q9Y5E5 795 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
SCAMP1-203ENST00000510030 SOWAHDA6NJG2 315 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 HUS1O60921 280 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 KIF11P52732 1056 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 SPOPLQ6IQ16 392 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 TOP6BLQ8N6T0 577 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 KIAA1524Q8TCG1 905 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 MMS19Q96T76 1030 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 HAUS4Q9H6D7 363 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 IL23AQ9NPF7 189 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 CISHQ9NSE2 258 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 KIAA1257Q9ULG3 409 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 INPP5FQ9Y2H2 1132 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 TTC3P53804 2025 aa17.89■□□□□ 0.45
SCAMP1-203ENST00000510030 TRIM43BA6NCK2 446 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 MEIS3P2A8K0S8 358 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 ESPNB1AK53 854 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 PODXLO00592 558 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 TACC1O75410 805 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 LCA5LO95447 670 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 PAEPP09466 180 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 EIF4A3P38919 411 aaKnown RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 INCA1Q0VD86 236 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 NAB2Q15742 525 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 SLC18A3Q16572 532 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 PSRC1Q6PGN9 363 aaPredicted RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 TMEM270Q6UE05 265 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 TRIM72Q6ZMU5 477 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 UNC93AQ86WB7 457 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms