RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 SLC25A3Q00325 362 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 TLE1Q04724 770 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 NFE2Q16621 373 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 METRNLQ641Q3 311 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 DBX2Q6ZNG2 339 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 JPH3Q8WXH2 748 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 CLPTM1LQ96KA5 538 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 DCLRE1CQ96SD1 692 aaKnown RBP8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 MYOCQ99972 504 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 GTPBP4Q9BZE4 634 aaKnown RBP8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 C11orf54Q9H0W9 315 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZIM2Q9NZV7 527 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 CHST2Q9Y4C5 530 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 DIP2BQ9P265 1576 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 MYO3AQ8NEV4 1616 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZFYVE9O95405 1425 aa8.71□□□□□ -1.01
TRAPPC11-206ENST00000509857 NPATQ14207 1427 aa8.71□□□□□ -1.01
TRAPPC11-206ENST00000509857 DRGXA6NNA5 263 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 DIRC3C9JPN6 131 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 POMCP01189 267 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 AMHP03971 560 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 NHLH2Q02577 135 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 ZNF529Q6P280 563 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 AIFM3Q96NN9 605 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 ZNF747Q9BV97 191 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC12A5Q9H2X9 1139 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 POGKQ9P215 609 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 RUVBL1Q9Y265 456 aaKnown RBP8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 EID1Q9Y6B2 187 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 PIK3C2BO00750 1634 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 PARD3Q8TEW0 1356 aa8.71□□□□□ -1.02
TRAPPC11-206ENST00000509857 SYNMO15061 1565 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 CAMSAP1Q5T5Y3 1602 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 RECQL4O94761 1208 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 RAP2BP61225 183 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 UBXN2BQ14CS0 331 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 ATAT1Q5SQI0 421 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 FAM102AQ5T9C2 384 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 CATIPQ7Z7H3 387 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 JDP2Q8WYK2 163 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 PUS7Q96PZ0 661 aaKnown RBP8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 KRTAP4-7Q9BYR0 210 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 FBXO34Q9NWN3 711 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 SORCS3Q9UPU3 1222 aa8.7□□□□□ -1.02
TRAPPC11-206ENST00000509857 AHRRA9YTQ3 701 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC16A6O15403 523 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 ALAS1P13196 640 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 CYP2C19P33261 490 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 CHN2P52757 468 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 PUM1Q14671 1186 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 CRIP3Q6Q6R5 217 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 GGNQ86UU5 652 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 HPS3Q969F9 1004 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 MVB12AQ96EY5 273 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 PLEKHG4BQ96PX9 1271 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 NEU1Q99519 415 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC46A2Q9BY10 475 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC52A1Q9NWF4 448 aa8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 EIF2B4Q9UI10 523 aaKnown RBP8.69□□□□□ -1.02
TRAPPC11-206ENST00000509857 PPLO60437 1756 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 DGCR2P98153 550 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 PGS1Q32NB8 556 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 THEMIS2Q5TEJ8 643 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 AGAP9Q5VTM2 703 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 GADL1Q6ZQY3 521 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 GDF7Q7Z4P5 450 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 RHOT2Q8IXI1 618 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 VPS11Q9H270 941 aa8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 LRPPRCP42704 1394 aaKnown RBP8.68□□□□□ -1.02
TRAPPC11-206ENST00000509857 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 SCAF4O95104 1147 aaKnown RBP8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 SCGB1D2O95969 90 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 CREMQ03060 361 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 PABPC1LQ4VXU2 614 aaKnown RBP8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 ZFPM1Q8IX07 1006 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 IL17RDQ8NFM7 739 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 CPT1CQ8TCG5 803 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 MAN1C1Q9NR34 630 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 POLHQ9Y253 713 aa8.67□□□□□ -1.02
TRAPPC11-206ENST00000509857 DISP3Q9P2K9 1392 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 TCRBV7S2A1N4TA0A589 114 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 GRM6O15303 877 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 FAM20BO75063 409 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 OFD1O75665 1012 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 MTHFD1P11586 935 aaKnown RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 MALP21145 153 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 LPOP22079 712 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 RNASE9P60153 205 aaKnown RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 GTF2H3Q13889 308 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 PPP2R5AQ15172 486 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 KHDC1Q4VXA5 237 aaKnown RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 CXorf57Q6NSI4 855 aaKnown RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 TUBA3EQ6PEY2 450 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms