RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ACAP3Q96P50 834 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 TCHPQ9BT92 498 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 KIAA1024Q9UPX6 916 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 ABLIM1O14639 778 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 MEFVO15553 781 aaPredicted RBP17.48■□□□□ 0.39
CXCL1-202ENST00000509101 HRO43593 1189 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 GDF9O60383 454 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 RPL9P32969 192 aaKnown RBP17.48■□□□□ 0.39
CXCL1-202ENST00000509101 KPNA1P52294 538 aaPredicted RBP17.48■□□□□ 0.39
CXCL1-202ENST00000509101 DMP1Q13316 513 aaPredicted RBP17.48■□□□□ 0.39
CXCL1-202ENST00000509101 LRRC32Q14392 662 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 HEATR6Q6AI08 1181 aaKnown RBP17.48■□□□□ 0.39
CXCL1-202ENST00000509101 MPZL3Q6UWV2 235 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 TMEM130Q8N3G9 435 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 TMEM134Q9H6X4 195 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 DDX19AQ9NUU7 478 aaKnown RBP17.48■□□□□ 0.39
CXCL1-202ENST00000509101 ARHGAP28Q9P2N2 729 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 PCDHB8Q9UN66 801 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 CHD6Q8TD26 2715 aa17.48■□□□□ 0.39
CXCL1-202ENST00000509101 CFAP47Q6ZTR5 3102 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 A0A1W2PRU2 124 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 K7ESF4 209 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 HIP1RO75146 1068 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 PROZP22891 400 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 ANAPC15P60006 121 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
CXCL1-202ENST00000509101 CSRP2Q16527 193 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 WDR44Q5JSH3 913 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 TTC38Q5R3I4 469 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 STXBP5Q5T5C0 1151 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 DAW1Q8N136 415 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 MSANTD3Q96H12 275 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 KMT5AQ9NQR1 393 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 ANKFY1Q9P2R3 1169 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 EML5Q05BV3 1969 aa17.47■□□□□ 0.39
CXCL1-202ENST00000509101 CHADO15335 359 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 VNN2O95498 520 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 OR4Q2P0C623 313 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
CXCL1-202ENST00000509101 NBR1Q14596 966 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 SEZ6Q53EL9 994 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 TXNDC11Q6PKC3 985 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 LONP2Q86WA8 852 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 TMC8Q8IU68 726 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 GPIHBP1Q8IV16 184 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 TTC8Q8TAM2 541 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 E2F7Q96AV8 911 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.39
CXCL1-202ENST00000509101 GPR88Q9GZN0 384 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 C8orf33Q9H7E9 229 aaPredicted RBP17.46■□□□□ 0.39
CXCL1-202ENST00000509101 C2orf42Q9NWW7 574 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 MAFFQ9ULX9 164 aa17.46■□□□□ 0.39
CXCL1-202ENST00000509101 SDK1Q7Z5N4 2213 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 E9PMD0 336 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 SPECC1L-ADORA2AF8WAN1 911 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 SLC16A4O15374 487 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 PAPSS2O95340 614 aaPredicted RBP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 MARCKSP29966 332 aaPredicted RBP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 HOXC13P31276 330 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 CTHP32929 405 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 CNR2P34972 360 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 YWHAHQ04917 246 aaPredicted RBP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 FCHO2Q0JRZ9 810 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 C1orf228Q6PIY5 440 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 CEP68Q76N32 757 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 FAM160A2Q8N612 972 aaPredicted RBP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 BEST2Q8NFU1 509 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 ZFYVE19Q96K21 471 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 RUSC1Q9BVN2 902 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 LRRC3Q9BY71 257 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 DNAJC25Q9H1X3 360 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 TIMM13Q9Y5L4 95 aaPredicted RBP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 ZNF638Q14966 1978 aaKnown RBP17.45■□□□□ 0.38
CXCL1-202ENST00000509101 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
CXCL1-202ENST00000509101 MLLT6P55198 1093 aaPredicted RBP17.44■□□□□ 0.38
CXCL1-202ENST00000509101 SPAG1Q07617 926 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 MAPK7Q13164 816 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 PLD1Q13393 1074 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 SLC10A6Q3KNW5 377 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 C8orf76Q96K31 380 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 TCHHQ07283 1943 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 ATG2BQ96BY7 2078 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 OBSL1O75147 1896 aa17.44■□□□□ 0.38
CXCL1-202ENST00000509101 CEP295Q9C0D2 2601 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 MYBPHLA2RUH7 354 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 M0QZQ0 153 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 CXCL8P10145 99 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 EPHB3P54753 998 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 DUSP4Q13115 394 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms