RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 FERP16591 822 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 HNRNPH3P31942 346 aaKnown RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 TAF6P49848 677 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 ADKP55263 362 aaKnown RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 JAM2P57087 298 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 RNASELQ05823 741 aaKnown RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 LRMPQ12912 555 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 CUL2Q13617 745 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 DRAP1Q14919 205 aaPredicted RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 CLLU1OSQ5K130 101 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 SFMBT2Q5VUG0 894 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 C9orf57Q5W0N0 161 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 ARHGEF19Q8IW93 802 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 LRRC8AQ8IWT6 810 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 LRRC43Q8N309 656 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 CXorf38Q8TB03 319 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 SHC3Q92529 594 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 BADQ92934 168 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 FAM84AQ96KN4 292 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 FAM193BQ96PV7 902 aaPredicted RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 PI4K2AQ9BTU6 479 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 DNAI2Q9GZS0 605 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 XYLT2Q9H1B5 865 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 CYP3A43Q9HB55 503 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 RNF19AQ9NV58 838 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 BZW2Q9Y6E2 419 aaKnown RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 TRIP11Q15643 1979 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 TTC3P53804 2025 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 PODXLO00592 558 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 FGFR1P11362 822 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 FECHP22830 423 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 SOX5P35711 763 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 WDR5P61964 334 aaKnown RBP11.13□□□□□ -0.63
RFC1-211ENST00000509084 CDK17Q00537 523 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 SOX4Q06945 474 aaPredicted RBP11.13□□□□□ -0.63
RFC1-211ENST00000509084 NAB2Q15742 525 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 ASIC2Q16515 512 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 MEA1Q16626 185 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 ARHGAP44Q17R89 818 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 WDR72Q3MJ13 1102 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 GJB7Q6PEY0 223 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 TMTC1Q8IUR5 882 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 CRIPAKQ8N1N5 446 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 TET1Q8NFU7 2136 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 DPF3Q92784 378 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 TOP1MTQ969P6 601 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 VWCEQ96DN2 955 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 TMEM175Q9BSA9 504 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 APOBEC3GQ9HC16 384 aaKnown RBP11.13□□□□□ -0.63
RFC1-211ENST00000509084 TBC1D13Q9NVG8 400 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 MIOSQ9NXC5 875 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
RFC1-211ENST00000509084 KPNA7A9QM74 516 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 TMEM189-UBE2V1I3L0A0 370 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 SERPING1P05155 500 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 FAM163BP0C2L3 166 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 ACRP10323 421 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 ANXA13P27216 316 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 PRKCIP41743 596 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 GUCY2FP51841 1108 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 BPIFB4P59827 614 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 APBA1Q02410 837 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 DSC1Q08554 894 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 CYP26C1Q6V0L0 522 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
RFC1-211ENST00000509084 DPH6Q7L8W6 267 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 CMTR2Q8IYT2 770 aaKnown RBP11.12□□□□□ -0.63
RFC1-211ENST00000509084 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 TATDN2Q93075 761 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 KREMEN1Q96MU8 473 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 SLC9A7Q96T83 725 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 BAG1Q99933 345 aaPredicted RBP11.12□□□□□ -0.63
RFC1-211ENST00000509084 GOLGA2P5Q9HBQ8 144 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
RFC1-211ENST00000509084 AJAP1Q9UKB5 411 aaPredicted RBP11.12□□□□□ -0.63
RFC1-211ENST00000509084 BRCA2P51587 3418 aa11.12□□□□□ -0.63
RFC1-211ENST00000509084 SSU72P8A0A1W2PR75 194 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 TBKBP1A7MCY6 615 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 ZBBXA8MT70 800 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 RNF225M0QZC1 329 aaPredicted RBP11.11□□□□□ -0.63
RFC1-211ENST00000509084 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 LRRN2O75325 713 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 DGKIO75912 1065 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 GFPT2O94808 682 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 CYLC1P35663 651 aaPredicted RBP11.11□□□□□ -0.63
RFC1-211ENST00000509084 ASPAP45381 313 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 PDE6CP51160 858 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 CLCNKBP51801 687 aa11.11□□□□□ -0.63
RFC1-211ENST00000509084 AFF1P51825 1210 aaKnown RBP11.11□□□□□ -0.63
RFC1-211ENST00000509084 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms