RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 CEBPBP17676 345 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 ABCD1P33897 745 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 ACOT2P49753 483 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 LILRA4P59901 499 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 YWHAHQ04917 246 aaPredicted RBP13.58□□□□□ -0.24
PDPN-208ENST00000509009 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
PDPN-208ENST00000509009 RRAGBQ5VZM2 374 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 TANGO2Q6ICL3 276 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 SLFN12LQ6IEE8 588 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 DSTYKQ6XUX3 929 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 ASCL5Q7RTU5 278 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
PDPN-208ENST00000509009 ZNF512Q96ME7 567 aaPredicted RBP13.58□□□□□ -0.24
PDPN-208ENST00000509009 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
PDPN-208ENST00000509009 CCDC39Q9UFE4 941 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 SPTBN4Q9H254 2564 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 EP300Q09472 2414 aaPredicted RBP13.57□□□□□ -0.24
PDPN-208ENST00000509009 MYMKA6NI61 221 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 PIRO00625 290 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 NRG2O14511 850 aaPredicted RBP13.57□□□□□ -0.24
PDPN-208ENST00000509009 SPTLC1O15269 473 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 MOSPD3O75425 235 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 OR4Q2P0C623 313 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 CPB1P15086 417 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 TYMPP19971 482 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 PAX3P23760 479 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 CCR2P41597 374 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 CEBPZQ03701 1054 aaKnown RBP13.57□□□□□ -0.24
PDPN-208ENST00000509009 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 ADALQ6DHV7 355 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 SV2BQ7L1I2 683 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 USP37Q86T82 979 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 DNAJC19Q96DA6 116 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 SENP8Q96LD8 212 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
PDPN-208ENST00000509009 STRA6Q9BX79 667 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 PANK2Q9BZ23 570 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 FOXQ1Q9C009 403 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 IKZF4Q9H2S9 585 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
PDPN-208ENST00000509009 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 DERAQ9Y315 318 aa13.57□□□□□ -0.24
PDPN-208ENST00000509009 MYO15AQ9UKN7 3530 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ANO9A1A5B4 782 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 PRR23AA6NEV1 266 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 OR6C75A6NL08 312 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 LRRN2O75325 713 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 PPP1R37O75864 691 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 GLULP15104 373 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ADSSP30520 456 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 EPHA5P54756 1037 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 PFKPQ01813 784 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 POU5F1Q01860 360 aaKnown RBP13.56□□□□□ -0.24
PDPN-208ENST00000509009 PRKCQQ04759 706 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 TWF1Q12792 350 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 GPR17Q13304 367 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 SLC39A14Q15043 492 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
PDPN-208ENST00000509009 FAM78AQ5JUQ0 283 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 OVOS1Q6IE37 1185 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 IQCEQ6IPM2 695 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 CRELD2Q6UXH1 353 aaPredicted RBP13.56□□□□□ -0.24
PDPN-208ENST00000509009 PDZD4Q76G19 769 aaPredicted RBP13.56□□□□□ -0.24
PDPN-208ENST00000509009 SFR1Q86XK3 245 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ELMOD1Q8N336 334 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 PJA1Q8NG27 643 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ELSPBP1Q96BH3 223 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ZSWIM3Q96MP5 696 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 USP28Q96RU2 1077 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 CRISPLD1Q9H336 500 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ASB7Q9H672 318 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 MTF2Q9Y483 593 aaPredicted RBP13.56□□□□□ -0.24
PDPN-208ENST00000509009 MORC2Q9Y6X9 1032 aaPredicted RBP13.56□□□□□ -0.24
PDPN-208ENST00000509009 GVINP1Q7Z2Y8 2422 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 CACNA1IQ9P0X4 2223 aa13.56□□□□□ -0.24
PDPN-208ENST00000509009 ZNF292O60281 2723 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 NFICP08651 508 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 GAP43P17677 238 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 FCARP24071 287 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 KCNA1Q09470 495 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 DUSP4Q13115 394 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 MYBPC2Q14324 1141 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 TMEM132DQ14C87 1099 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 POSTNQ15063 836 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 C1orf210Q8IVY1 113 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 NKD2Q969F2 451 aaPredicted RBP13.55□□□□□ -0.24
PDPN-208ENST00000509009 PGLYRP2Q96PD5 576 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 LRRC3Q9BY71 257 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 ZFP14Q9HCL3 533 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
PDPN-208ENST00000509009 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms