RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 UTYO14607 1347 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 EMSYQ7Z589 1322 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SYNJ2BP-COX16A0A087WUM0 186 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TMEM247A6NEH6 219 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 APOL1O14791 398 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PTDSS1P48651 473 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 RPS6KA3P51812 740 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TFAMQ00059 246 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 FASTKD1Q53R41 847 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MIS18BP1Q6P0N0 1132 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 STX19Q8N4C7 294 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 HEXIM2Q96MH2 286 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PAGR1Q9BTK6 254 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 COX16Q9P0S2 106 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 CIDEBQ9UHD4 219 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SOX13Q9UN79 622 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 GLRA3O75311 464 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NPTXRO95502 500 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 GUCY1A2P33402 732 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 SPRP35270 261 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 KLK7P49862 253 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 OVGP1Q12889 678 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 BLMHQ13867 455 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 PIGHQ14442 188 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ZYXQ15942 572 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 RGS21Q2M5E4 152 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ARMCX4Q5H9R4 360 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TTC27Q6P3X3 843 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NET1Q7Z628 596 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF677Q86XU0 584 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ZCCHC7Q8N3Z6 543 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 FBXO25Q8TCJ0 367 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 IGDCC4Q8TDY8 1250 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ACSBG1Q96GR2 724 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 FAR2Q96K12 515 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 ZFYVE19Q96K21 471 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MAP3K14Q99558 947 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 MSTO1Q9BUK6 570 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 NACA2Q9H009 215 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 UNC45AQ9H3U1 944 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TRPC7Q9HCX4 862 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 HMG20AQ9NP66 347 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TIMMDC1Q9NPL8 285 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 TFR2Q9UP52 801 aa7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 R3HDM2Q9Y2K5 976 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-224ENST00000508474 UGGT1Q9NYU2 1555 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 LOC100653049A0A140TA62 436 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 CCDC78A2IDD5 438 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 TPD52L2O43399 206 aaKnown RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 WBP4O75554 376 aaKnown RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 KRT34O76011 436 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 ALAS1P13196 640 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 CCNHP51946 323 aaPredicted RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 JAK3P52333 1124 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 NR1H2P55055 460 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 PPP6R3Q5H9R7 873 aaPredicted RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF667Q5HYK9 610 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 CREG2Q8IUH2 290 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 RNF217Q8TC41 542 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 ITFG2Q969R8 447 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 FAM111AQ96PZ2 611 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 EHD4Q9H223 541 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 WDR35Q9P2L0 1181 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 NXF1Q9UBU9 619 aaKnown RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 DUSP10Q9Y6W6 482 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF804BA4D1E1 1349 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 F8W8V4 182 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 GOLGA8TH3BQL2 631 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 TRIM24O15164 1050 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 HLA-DPA1P20036 260 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 SDC4P31431 198 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 GSCP56915 257 aaPredicted RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 ACTR2P61160 394 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 DEPDC1Q5TB30 811 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 SYDE2Q5VT97 1194 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 RSBN1Q5VWQ0 802 aaPredicted RBP7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 NDUFAF2Q8N183 169 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 MCPH1Q8NEM0 835 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 KRT35Q92764 455 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 LRRC39Q96DD0 335 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 EURLQ9NYK6 297 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 DCDC2Q9UHG0 476 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 APPL1Q9UKG1 709 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 GTF3C4Q9UKN8 822 aa7.65□□□□□ -1.18
UBE2D3-224ENST00000508474 ANKARQ7Z5J8 1434 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 SLCO1B7G3V0H7 640 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 NEMP1O14524 444 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 ZBTB5O15062 677 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 KIAA0391O15091 583 aaKnown RBP7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 PSMD3O43242 534 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 PSTPIP1O43586 416 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 EYA4O95677 639 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 FESP07332 822 aa7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 PLEKP08567 350 aaPredicted RBP7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 CD44P16070 742 aaKnown RBP7.65□□□□□ -1.19
UBE2D3-224ENST00000508474 DRD4P21917 467 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms