RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TCEAL4Q96EI5 215 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 TSPAN18Q96SJ8 248 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 CORO1BQ9BR76 489 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 FOXQ1Q9C009 403 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 ST6GALNAC4Q9H4F1 302 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 ZHX3Q9H4I2 956 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 RPF1Q9H9Y2 349 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 TIMM13Q9Y5L4 95 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 COL4A2P08572 1712 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 EP300Q09472 2414 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 FANCMQ8IYD8 2048 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 F5P12259 2224 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 ANKRD63C9JTQ0 380 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 ECI2O75521 394 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 VNN2O95498 520 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 NFICP08651 508 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 CPB1P15086 417 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 GLULP15104 373 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 SYT1P21579 422 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 FCARP24071 287 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 ABCD1P33897 745 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 DDIT3P35638 169 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 TWF1Q12792 350 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 SNW1Q13573 536 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 MLF2Q15773 248 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 SPATA1Q5VX52 437 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 JADE1Q6IE81 842 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 RNF19BQ6ZMZ0 732 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 SFR1Q86XK3 245 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 MCRS1Q96EZ8 462 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 CLIC6Q96NY7 704 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 DDX23Q9BUQ8 820 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 CEP72Q9P209 647 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 MAFFQ9ULX9 164 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 SIT1Q9Y3P8 196 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 SRPRBQ9Y5M8 271 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 STYXL1Q9Y6J8 313 aa14.13□□□□□ -0.15
HMGCS1-205ENST00000508319 XPOTO43592 962 aaKnown RBP14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 PPP1R37O75864 691 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 MICAL2O94851 1124 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 OR4Q2P0C623 313 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 EPHA5P54756 1037 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 DYMQ7RTS9 669 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 NKD2Q969F2 451 aaPredicted RBP14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 SHDQ96IW2 340 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 OXCT2Q9BYC2 517 aaPredicted RBP14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 PLA2G2FQ9BZM2 168 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 IKZF4Q9H2S9 585 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 CRISPLD1Q9H336 500 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 YIPF1Q9Y548 306 aa14.12□□□□□ -0.15
HMGCS1-205ENST00000508319 TCHHQ07283 1943 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 KANSL1LA0AUZ9 987 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 MYMKA6NI61 221 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 SPTLC1O15269 473 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 LRRN2O75325 713 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 MOSPD3O75425 235 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 TYMPP19971 482 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 ACOT2P49753 483 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 LILRA4P59901 499 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 PFKPQ01813 784 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 TMEM132DQ14C87 1099 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 OTOGLQ3ZCN5 2332 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 SLC44A4Q53GD3 710 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 FAM78AQ5JUQ0 283 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 C9orf57Q5W0N0 161 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 ADALQ6DHV7 355 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 TANGO2Q6ICL3 276 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 PDZD4Q76G19 769 aaPredicted RBP14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 ZNF720Q7Z2F6 126 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 CD302Q8IX05 232 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 HS6ST3Q8IZP7 471 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 KRI1Q8N9T8 703 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 ELSPBP1Q96BH3 223 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 DNAJC19Q96DA6 116 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 INTS4Q96HW7 963 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 PGLYRP2Q96PD5 576 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 STRA6Q9BX79 667 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 C2CD2Q9Y426 696 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 MORC2Q9Y6X9 1032 aaPredicted RBP14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 DCHS1Q96JQ0 3298 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 TICRRQ7Z2Z1 1910 aa14.11□□□□□ -0.15
HMGCS1-205ENST00000508319 ANO9A1A5B4 782 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 OR6C75A6NL08 312 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 PIRO00625 290 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ZNF197O14709 1029 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ODC1P11926 461 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ADSSP30520 456 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 CEBPZQ03701 1054 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 PRKCQQ04759 706 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 GPR17Q13304 367 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 CYP4A22Q5TCH4 519 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 OVOS1Q6IE37 1185 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 IQCEQ6IPM2 695 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 DSTYKQ6XUX3 929 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 USP37Q86T82 979 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ELMOD1Q8N336 334 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms