RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ARHGAP8P85298 464 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CAMK2DQ13557 499 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM47CQ5HY64 1035 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ATPAF1Q5TC12 328 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SULT6B1Q6IMI4 303 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CLEC2AQ6UVW9 174 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PPP1R21Q6ZMI0 780 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 IGSF22Q8N9C0 903 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 TMEM145Q8NBT3 493 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SPATA20Q8TB22 786 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 TBC1D22AQ8WUA7 517 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM167AQ96KS9 214 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SLC2A13Q96QE2 648 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 DDX50Q9BQ39 737 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 VCX3BQ9H321 246 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SEMA6BQ9H3T3 888 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 GPR108Q9NPR9 543 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SNX15Q9NRS6 342 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 MBIPQ9NS73 344 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SALL4Q9UJQ4 1053 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CAMK2AQ9UQM7 478 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PIN4Q9Y237 131 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 FMN1Q68DA7 1419 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ATP8B3O60423 1300 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 A0A1W2PPC4 97 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PHF2O75151 1096 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 A1BGP04217 495 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ITGB1P05556 798 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 LTA4HP09960 611 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 RARGP13631 454 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 NME1P15531 152 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CES1P23141 567 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CCNHP51946 323 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 AP3M2P53677 418 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 FOXO4P98177 505 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 KIF23Q02241 960 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 HABP2Q14520 560 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 RCN1Q15293 331 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ADCK5Q3MIX3 580 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 TOR1AIP1Q5JTV8 583 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CAVIN1Q6NZI2 390 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 KLC3Q6P597 504 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 KLHDC10Q6PID8 442 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CAND1Q86VP6 1230 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ZBTB8BQ8NAP8 495 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 GAL3ST3Q96A11 431 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ZC3H10Q96K80 434 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ATP6V1G3Q96LB4 118 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CMTM3Q96MX0 182 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CITED2Q99967 270 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PACSIN1Q9BY11 444 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 GPR63Q9BZJ6 419 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 MS4A5Q9H3V2 200 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 ZMAT3Q9HA38 289 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PNPLA8Q9NP80 782 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 NRIP3Q9NQ35 241 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 IL19Q9UHD0 177 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 TUBD1Q9UJT1 453 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 CARD8Q9Y2G2 431 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 PIAS3Q9Y6X2 628 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 FAM169AQ9Y6X4 670 aa8.03□□□□□ -1.12
PDGFRA-206ENST00000508170 IFT140Q96RY7 1462 aa8.02□□□□□ -1.12
PDGFRA-206ENST00000508170 KDRP35968 1356 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ANKRD34BA5PLL1 514 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 EBAG9O00559 213 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 SPOPO43791 374 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 RNF40O75150 1001 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TSPAN9O75954 239 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TNFRSF6BO95407 300 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 EPHX1P07099 455 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 HMOX1P09601 288 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 KCNA5P22460 613 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 GPC1P35052 558 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF143P52747 638 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 MRPS5P82675 430 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 YWHAHQ04917 246 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 RPA4Q13156 261 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 SNX17Q15036 470 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 BBS9Q3SYG4 887 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 KMT5BQ4FZB7 885 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ZCCHC12Q6PEW1 402 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TAGAPQ8N103 731 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 DPP10Q8N608 796 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF566Q969W8 418 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 BCL7BQ9BQE9 202 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 THUMPD3Q9BV44 507 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 NSRP1Q9H0G5 558 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 INTS2Q9H0H0 1204 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TASP1Q9H6P5 420 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 SUFUQ9UMX1 484 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 BACE2Q9Y5Z0 518 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 CFAP65Q6ZU64 1925 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ASXL2Q76L83 1435 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms