RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 KCNJ6P48051 423 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 TAF6P49848 677 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 CLCNKBP51801 687 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 TUSC3Q13454 348 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 NAB2Q15742 525 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 SV2CQ496J9 727 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 OTOP2Q7RTS6 562 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 TNS4Q8IZW8 715 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 LRRC52Q8N7C0 313 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 CCDC112Q8NEF3 446 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 ARID3AQ99856 593 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 KCNF1Q9H3M0 494 aa18.73■□□□□ 0.59
RNF4-209ENST00000507784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
RNF4-209ENST00000507784 LTBP2Q14767 1821 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 INPPL1O15357 1258 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 STAU1O95793 577 aaKnown RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 WEE2P0C1S8 567 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 FERP16591 822 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 CD58P19256 250 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 RPL9P32969 192 aaKnown RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 RAP1GAPP47736 663 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 PAN2Q504Q3 1202 aaKnown RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 TDRD12Q587J7 1177 aaKnown RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 FAM117BQ6P1L5 589 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 SYN2Q92777 582 aaPredicted RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 CASD1Q96PB1 797 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 LBHD1Q9BQE6 289 aaPredicted RBP18.72■□□□□ 0.59
RNF4-209ENST00000507784 GPR88Q9GZN0 384 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 TBC1D13Q9NVG8 400 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 SNX9Q9Y5X1 595 aa18.72■□□□□ 0.59
RNF4-209ENST00000507784 BAIAP3O94812 1187 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 DDHD2O94830 711 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 CCDC172P0C7W6 258 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 WDR5P61964 334 aaKnown RBP18.71■□□□□ 0.59
RNF4-209ENST00000507784 DEFB103AP81534 67 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 CCZ1BP86790 482 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 CCZ1P86791 482 aaPredicted RBP18.71■□□□□ 0.59
RNF4-209ENST00000507784 KLHL30Q0D2K2 578 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 E4F1Q66K89 784 aaPredicted RBP18.71■□□□□ 0.59
RNF4-209ENST00000507784 CYP26C1Q6V0L0 522 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 ZNF280BQ86YH2 543 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 TMTC1Q8IUR5 882 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 FMNL3Q8IVF7 1028 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 SHC3Q92529 594 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 DDX27Q96GQ7 796 aaKnown RBP18.71■□□□□ 0.59
RNF4-209ENST00000507784 UROC1Q96N76 676 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 CHP1Q99653 195 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 VRTNQ9H8Y1 702 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 AIPL1Q9NZN9 384 aa18.71■□□□□ 0.59
RNF4-209ENST00000507784 FNDC1Q4ZHG4 1894 aaPredicted RBP18.71■□□□□ 0.59
RNF4-209ENST00000507784 KPNA7A9QM74 516 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 CYP26A1O43174 497 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 SERPING1P05155 500 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 ASPAP45381 313 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 OR1G1P47890 313 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 CDH8P55286 799 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 HS1BP3Q53T59 392 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 WDR59Q6PJI9 974 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 DSTYKQ6XUX3 929 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 C16orf59Q7L2K0 433 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 JAKMIP2Q96AA8 810 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 PAAF1Q9BRP4 392 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 MRPL9Q9BYD2 267 aaKnown RBP18.7■□□□□ 0.58
RNF4-209ENST00000507784 DEF6Q9H4E7 631 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 SMYD3Q9H7B4 428 aa18.7■□□□□ 0.58
RNF4-209ENST00000507784 SOWAHDA6NJG2 315 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 SPTLC1O15269 473 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
RNF4-209ENST00000507784 EIF4A3P38919 411 aaKnown RBP18.69■□□□□ 0.58
RNF4-209ENST00000507784 LILRA4P59901 499 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 MEA1Q16626 185 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 UPP1Q16831 310 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 TMEM270Q6UE05 265 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 IRF2BP2Q7Z5L9 587 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 TMCO2Q7Z6W1 182 aaPredicted RBP18.69■□□□□ 0.58
RNF4-209ENST00000507784 TMEM139Q8IV31 216 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 FAM71AQ8IYT1 594 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 TOP1MTQ969P6 601 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 FAXDC2Q96IV6 333 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 BCO2Q9BYV7 579 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 SDCBP2Q9H190 292 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 HAUS4Q9H6D7 363 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 NRDE2Q9H7Z3 1164 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 NHEJ1Q9H9Q4 299 aaPredicted RBP18.69■□□□□ 0.58
RNF4-209ENST00000507784 CYP3A43Q9HB55 503 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 CISHQ9NSE2 258 aa18.69■□□□□ 0.58
RNF4-209ENST00000507784 BRCA2P51587 3418 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 CYB561D2O14569 222 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 HUS1O60921 280 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 B3GAT3O94766 335 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 PLEKP08567 350 aaPredicted RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 ACO1P21399 889 aaKnown RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 IGFBP6P24592 240 aaPredicted RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 EPHB4P54760 987 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 ZNF394Q53GI3 561 aa18.68■□□□□ 0.58
RNF4-209ENST00000507784 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 PSRC1Q6PGN9 363 aaPredicted RBP18.68■□□□□ 0.58
RNF4-209ENST00000507784 DCLRE1AQ6PJP8 1040 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms