RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 LEMD2Q8NC56 503 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 CACTINQ8WUQ7 758 aaKnown RBP16.84■□□□□ 0.29
DDR1-258ENST00000506573 FGF13Q92913 245 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 SMOC2Q9H3U7 446 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 MAGEF1Q9HAY2 307 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 AVENQ9NQS1 362 aaPredicted RBP16.84■□□□□ 0.29
DDR1-258ENST00000506573 FAM13BQ9NYF5 915 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
DDR1-258ENST00000506573 INSL5Q9Y5Q6 135 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 C2orf16Q68DN1 1984 aa16.84■□□□□ 0.29
DDR1-258ENST00000506573 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
DDR1-258ENST00000506573 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
DDR1-258ENST00000506573 RHOP08100 348 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 CFHP08603 1231 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 GARTP22102 1010 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 PNPLA4P41247 253 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 ME1P48163 572 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 AARSP49588 968 aaKnown RBP eCLIP16.83■□□□□ 0.28
DDR1-258ENST00000506573 VCPP55072 806 aaKnown RBP16.83■□□□□ 0.28
DDR1-258ENST00000506573 LILRA4P59901 499 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 NTHL1P78549 312 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 PFKPQ01813 784 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 HTR4Q13639 388 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 IER5LQ5T953 404 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 PDZD4Q76G19 769 aaPredicted RBP16.83■□□□□ 0.28
DDR1-258ENST00000506573 RSAD2Q8WXG1 361 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 SHDQ96IW2 340 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 ZNF560Q96MR9 790 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 DPP3Q9NY33 737 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 DNMT3BQ9UBC3 853 aaKnown RBP16.83■□□□□ 0.28
DDR1-258ENST00000506573 NUMBLQ9Y6R0 609 aa16.83■□□□□ 0.28
DDR1-258ENST00000506573 ZDBF2Q9HCK1 2354 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
DDR1-258ENST00000506573 PPP1R37O75864 691 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 MICAL2O94851 1124 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 F13A1P00488 732 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 NFICP08651 508 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
DDR1-258ENST00000506573 ALDH1A3P47895 512 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 TAF6P49848 677 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
DDR1-258ENST00000506573 C9orf57Q5W0N0 161 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 THEM5Q8N1Q8 247 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
DDR1-258ENST00000506573 SENP8Q96LD8 212 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 CORO1BQ9BR76 489 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 FAM213AQ9BRX8 229 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 HCFC1R1Q9NWW0 138 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 TRIP11Q15643 1979 aa16.82■□□□□ 0.28
DDR1-258ENST00000506573 MYO10Q9HD67 2058 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 FRMD3A2A2Y4 597 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 EPHB3P54753 998 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 ASIC1P78348 528 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 SV2CQ496J9 727 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 PRSS33Q8NF86 280 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 ITFG1Q8TB96 612 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 NOC3LQ8WTT2 800 aaKnown RBP16.81■□□□□ 0.28
DDR1-258ENST00000506573 ATOH1Q92858 354 aaPredicted RBP16.81■□□□□ 0.28
DDR1-258ENST00000506573 DHX58Q96C10 678 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 SLC2A4RGQ9NR83 387 aa16.81■□□□□ 0.28
DDR1-258ENST00000506573 RBAKQ9NYW8 714 aaPredicted RBP16.81■□□□□ 0.28
DDR1-258ENST00000506573 TIMM13Q9Y5L4 95 aaPredicted RBP16.81■□□□□ 0.28
DDR1-258ENST00000506573 ZNF318Q5VUA4 2279 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 PIRO00625 290 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 NARSO43776 548 aaKnown RBP16.8■□□□□ 0.28
DDR1-258ENST00000506573 FGF19O95750 216 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 AOC1P19801 751 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 TWF1Q12792 350 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 GPR17Q13304 367 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
DDR1-258ENST00000506573 PARM1Q6UWI2 310 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
DDR1-258ENST00000506573 RNF19BQ6ZMZ0 732 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 NPAS3Q8IXF0 933 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 KBTBD4Q9NVX7 518 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 CA14Q9ULX7 337 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
DDR1-258ENST00000506573 PIEZO1Q92508 2521 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 A0A087X0B3 334 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 ANO9A1A5B4 782 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 TISP43B9A030 160 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 CYB561D2O14569 222 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 EXTL3O43909 919 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 SEC24AO95486 1093 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 CYP11A1P05108 521 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 ADSSP30520 456 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 TFAMQ00059 246 aaKnown RBP16.79■□□□□ 0.28
DDR1-258ENST00000506573 SURF1Q15526 300 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 BRSK2Q8IWQ3 736 aa16.79■□□□□ 0.28
DDR1-258ENST00000506573 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms