RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NDUFV1P49821 464 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 DSG1Q02413 1049 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 SPAG1Q07617 926 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 PNOCQ13519 176 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 MYBPC2Q14324 1141 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 NR6A1Q15406 480 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 PTPN14Q15678 1187 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 ZBTB6Q15916 424 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 PTPRNQ16849 979 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 FAM171A1Q5VUB5 890 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 KIAA0319Q5VV43 1072 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 SPATA1Q5VX52 437 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 JADE1Q6IE81 842 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 ELMSAN1Q6PJG2 1045 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 TAS1R1Q7RTX1 841 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 ADGRD2Q7Z7M1 963 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 C12orf56Q8IXR9 622 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 RNF168Q8IYW5 571 aaPredicted RBP7.87□□□□□ -1.15
GYPB-206ENST00000506516 XXYLT1Q8NBI6 393 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 EPS8L1Q8TE68 723 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 HASPINQ8TF76 798 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 AUTS2Q8WXX7 1259 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 RIN2Q8WYP3 895 aaPredicted RBP7.87□□□□□ -1.15
GYPB-206ENST00000506516 CASP10Q92851 521 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 SAAL1Q96ER3 474 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 TTPALQ9BTX7 342 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 UBE2ZQ9H832 354 aaPredicted RBP7.87□□□□□ -1.15
GYPB-206ENST00000506516 GOLGA2P5Q9HBQ8 144 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 AGPAT3Q9NRZ7 376 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 CACNG4Q9UBN1 327 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 FAM50BQ9Y247 325 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 ARHGEF37A1IGU5 675 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 F8W810 466 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 GOLGA6L22H0YM25 854 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 MEFVO15553 781 aaPredicted RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 EXOC3O60645 756 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 CLASP2O75122 1294 aaKnown RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 C1RP00736 705 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 ADH1AP07327 375 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 CNPP09543 421 aaKnown RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 HOXB8P17481 243 aaPredicted RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 KCNA5P22460 613 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 RPL13P26373 211 aaKnown RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 MCM4P33991 863 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 GTF2F1P35269 517 aaKnown RBP eCLIP7.86□□□□□ -1.15
GYPB-206ENST00000506516 PPP1R2P41236 205 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 MMP16P51512 607 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 CYP2J2P51589 502 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 TFAMQ00059 246 aaKnown RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 SOX4Q06945 474 aaPredicted RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 STIM1Q13586 685 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 COL19A1Q14993 1142 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 SNRNP35Q16560 246 aaKnown RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 DUOXA2Q1HG44 320 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 LEXMQ3ZCV2 418 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 ZNF658Q5TYW1 1059 aaPredicted RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 DSTYKQ6XUX3 929 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 TMEM184AQ6ZMB5 413 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 CLEC17AQ6ZS10 378 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 SLC9A9Q8IVB4 645 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 GUF1Q8N442 669 aaKnown RBP7.86□□□□□ -1.15
GYPB-206ENST00000506516 KIAA0895Q8NCT3 520 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 TMEM174Q8WUU8 243 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 FBXL18Q96ME1 805 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 KLHL5Q96PQ7 755 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 ASB2Q96Q27 587 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 FNBP1Q96RU3 617 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 VN1R3Q9BXE9 311 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 RXFP1Q9HBX9 757 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 PRDM6Q9NQX0 595 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 DPP3Q9NY33 737 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 FNIP2Q9P278 1114 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 TUBGCP4Q9UGJ1 667 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 MAPK8IP1Q9UQF2 711 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 PCDHGC5Q9Y5F6 944 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 PCDHA5Q9Y5H7 936 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 HCFC2Q9Y5Z7 792 aa7.86□□□□□ -1.15
GYPB-206ENST00000506516 MYH11P35749 1972 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 H7C4K7 107 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 PIRO00625 290 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 SYN3O14994 580 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 TEX28O15482 410 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 LINC01565O15544 149 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 TNNC2P02585 160 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 NFICP08651 508 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 TNNI1P19237 187 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 FGFR3P22607 806 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 LTBRP36941 435 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 LILRA4P59901 499 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 RBP5P82980 135 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 TFF2Q03403 129 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 KCNC3Q14003 757 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 RTP2Q5QGT7 225 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 C9orf57Q5W0N0 161 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 LLGL2Q6P1M3 1020 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 CD300LGQ6UXG3 332 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 ANKS3Q6ZW76 656 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms