RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 PAX3P23760 479 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 HOXA9P31269 272 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 LILRA4P59901 499 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 YWHAHQ04917 246 aaPredicted RBP16.82■□□□□ 0.28
MED28-204ENST00000506409 UVSSAQ2YD98 709 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 USP37Q86T82 979 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 NELFCDQ8IXH7 590 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 ZNF461Q8TAF7 563 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 C11orf16Q9NQ32 467 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 EXOC1Q9NV70 894 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 TIMM13Q9Y5L4 95 aaPredicted RBP16.82■□□□□ 0.28
MED28-204ENST00000506409 WDR27A2RRH5 827 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 GPR37L1O60883 481 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 MYL1P05976 194 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 ODC1P11926 461 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 WNT7BP56706 349 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
MED28-204ENST00000506409 RTL10Q7L3V2 364 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 HS2ST1Q7LGA3 356 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 ZDHHC14Q8IZN3 488 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 AGPAT3Q9NRZ7 376 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 HSPBP1Q9NZL4 362 aa16.81■□□□□ 0.28
MED28-204ENST00000506409 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 SPTLC1O15269 473 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 CCL16O15467 120 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 TGFB1I1O43294 461 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 KLRC4O43908 158 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 XYLBO75191 536 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 ABLIM3O94929 683 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 OAZ2O95190 189 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 CPB1P15086 417 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 TYMPP19971 482 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 ELF1P32519 619 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 TAF6P49848 677 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 SNRPFP62306 86 aaKnown RBP16.8■□□□□ 0.28
MED28-204ENST00000506409 PTPN21Q16825 1174 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 BMT2Q1RMZ1 405 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 TPGS2Q68CL5 300 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 CBWD2Q8IUF1 395 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 EDAQ92838 391 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 SENP8Q96LD8 212 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 LRFN3Q9BTN0 628 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 OXCT2Q9BYC2 517 aaPredicted RBP16.8■□□□□ 0.28
MED28-204ENST00000506409 GOLPH3LQ9H4A5 285 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 PDE11AQ9HCR9 933 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 LIMD1Q9UGP4 676 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 POLIQ9UNA4 740 aa16.8■□□□□ 0.28
MED28-204ENST00000506409 ARHGEF37A1IGU5 675 aa16.79■□□□□ 0.28
MED28-204ENST00000506409 PRRG1O14668 218 aa16.79■□□□□ 0.28
MED28-204ENST00000506409 ATF2P15336 505 aa16.79■□□□□ 0.28
MED28-204ENST00000506409 GBP2P32456 591 aaPredicted RBP16.79■□□□□ 0.28
MED28-204ENST00000506409 ZXDAP98168 799 aa16.79■□□□□ 0.28
MED28-204ENST00000506409 KNOP1Q1ED39 458 aaKnown RBP16.79■□□□□ 0.28
MED28-204ENST00000506409 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
MED28-204ENST00000506409 OVOS1Q6IE37 1185 aa16.79■□□□□ 0.28
MED28-204ENST00000506409 GRASPQ7Z6J2 395 aaPredicted RBP16.79■□□□□ 0.28
MED28-204ENST00000506409 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
MED28-204ENST00000506409 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 PRR33A8MZF0 331 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 CLIC2O15247 247 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 N4BP1O75113 896 aaKnown RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 ZNF202O95125 648 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 RPN1P04843 607 aaKnown RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 ITGB3P05106 788 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 ASGR2P07307 311 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 POU2F2P09086 479 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 TMEM191BP0C7N4 346 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 POLR2BP30876 1174 aaKnown RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 PNPLA4P41247 253 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 CYP2J2P51589 502 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 STK4Q13043 487 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 PSMD2Q13200 908 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 SURF1Q15526 300 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 SNRNP35Q16560 246 aaKnown RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 SV2CQ496J9 727 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 KRBA2Q6ZNG9 492 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 GET4Q7L5D6 327 aaPredicted RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 C1orf127Q8N9H9 656 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 ZNF560Q96MR9 790 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 MTMR12Q9C0I1 747 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 CYP4F11Q9HBI6 524 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 CGNQ9P2M7 1197 aaKnown RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 AFF4Q9UHB7 1163 aaKnown RBP16.78■□□□□ 0.28
MED28-204ENST00000506409 DSEQ9UL01 958 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 SORCS3Q9UPU3 1222 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 SCN1AP35498 2009 aa16.78■□□□□ 0.28
MED28-204ENST00000506409 OR6C75A6NL08 312 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 KPNA7A9QM74 516 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 CYB561D2O14569 222 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 LRG1P02750 347 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 CYP11A1P05108 521 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 FSHRP23945 695 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 ADCY1Q08828 1119 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 MTMR3Q13615 1198 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 TRIM67Q6ZTA4 783 aa16.77■□□□□ 0.28
MED28-204ENST00000506409 TCEAL8Q8IYN2 117 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms