RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PPP6R2O75170 966 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 GCNT3O95395 438 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 CYP3A5P20815 502 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 CCR2P41597 374 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 L1TD1Q5T7N2 865 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 C9orf57Q5W0N0 161 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 PARM1Q6UWI2 310 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 RNF19BQ6ZMZ0 732 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 CCDC73Q6ZRK6 1079 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 ZNF461Q8TAF7 563 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 FGF13Q92913 245 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 SAAL1Q96ER3 474 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 PANK4Q9NVE7 773 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 NUMBLQ9Y6R0 609 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 OBSL1O75147 1896 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 DENND4CQ5VZ89 1909 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 ARHGEF37A1IGU5 675 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 KRBA1A5PL33 1030 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 GOLGA8IPA6NC78 632 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 GOLGA8JA6NMD2 632 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 PIRO00625 290 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 YEATS4O95619 227 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 CFHP08603 1231 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 TXLNAP40222 546 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 DNM1Q05193 864 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 ELMSAN1Q6PJG2 1045 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 NPAS3Q8IXF0 933 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 TTC9BQ8N6N2 239 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 NKD2Q969F2 451 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 DHX58Q96C10 678 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 TCEAL4Q96EI5 215 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 ZNF396Q96N95 335 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 CBWD1Q9BRT8 395 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 OLFML3Q9NRN5 406 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 KBTBD4Q9NVX7 518 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 SEL1LQ9UBV2 794 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 PCDHA7Q9UN72 937 aa18.16■□□□□ 0.5
PDLIM7-215ENST00000506161 CUTAO60888 179 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 ATF2P15336 505 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 GAP43P17677 238 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 LILRA4P59901 499 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 HS6ST3Q8IZP7 471 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 POMGNT1Q8WZA1 660 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 HVCN1Q96D96 273 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 BORCS6Q96GS4 357 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 RTP3Q9BQQ7 232 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 TRIM9Q9C026 710 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 PCIF1Q9H4Z3 704 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 CYP4F11Q9HBI6 524 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 CEP72Q9P209 647 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 IGSF9Q9P2J2 1179 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 INSL5Q9Y5Q6 135 aa18.15■□□□□ 0.5
PDLIM7-215ENST00000506161 MIA3Q5JRA6 1907 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 H7C4K7 107 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 MOSPD3O75425 235 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 OAZ2O95190 189 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 RHOP08100 348 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 POU2F2P09086 479 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 CEBPBP17676 345 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 ADCY1Q08828 1119 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 TMEM132DQ14C87 1099 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 PRSS36Q5K4E3 855 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 ZNF280DQ6N043 979 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 TCEAL8Q8IYN2 117 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 GRAMD1CQ8IYS0 662 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 OR10T2Q8NGX3 314 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 CXorf38Q8TB03 319 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 SENP8Q96LD8 212 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 PGLYRP2Q96PD5 576 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 FAM213AQ9BRX8 229 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 PLA2G2FQ9BZM2 168 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 CDH7Q9ULB5 785 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 NCANO14594 1321 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 PTPRJQ12913 1337 aa18.14■□□□□ 0.49
PDLIM7-215ENST00000506161 TICRRQ7Z2Z1 1910 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 SCP2P22307 547 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 KYAT1Q16773 422 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 PABPC1LQ4VXU2 614 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 FRMD5Q7Z6J6 570 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 SIX5Q8N196 739 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 BEST2Q8NFU1 509 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 GPR152Q8TDT2 470 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 ACCSQ96QU6 501 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 KXD1Q9BQD3 176 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 DNAJC25Q9H1X3 360 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 BLZF1Q9H2G9 400 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 CA14Q9ULX7 337 aa18.13■□□□□ 0.49
PDLIM7-215ENST00000506161 KIF26AQ9ULI4 1882 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 XYLBO75191 536 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 SOAT2O75908 522 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 CPB1P15086 417 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 GJA1P17302 382 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 YWHAHQ04917 246 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 EHHADHQ08426 723 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 SLFN12LQ6IEE8 588 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 DSTYKQ6XUX3 929 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms